Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf213E9Q555 Gm37847-201ENSMUST00000192163 1497 ntBASIC11.3□□□□□ -0.6
Rnf213E9Q555 Gm31748-201ENSMUST00000194938 1497 ntBASIC11.3□□□□□ -0.6
Rnf213E9Q555 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Rnf213E9Q555 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf213E9Q555 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC11.3□□□□□ -0.6
Rnf213E9Q555 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Rnf213E9Q555 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf213E9Q555 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf213E9Q555 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf213E9Q555 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf213E9Q555 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf213E9Q555 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf213E9Q555 Gm8495-201ENSMUST00000188740 694 ntBASIC11.29□□□□□ -0.6
Rnf213E9Q555 Golgb1-201ENSMUST00000023534 498 ntBASIC11.28□□□□□ -0.6
Rnf213E9Q555 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.28□□□□□ -0.6
Rnf213E9Q555 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf213E9Q555 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf213E9Q555 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Gm9847-201ENSMUST00000052528 599 ntBASIC11.28□□□□□ -0.6
Rnf213E9Q555 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf213E9Q555 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf213E9Q555 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf213E9Q555 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf213E9Q555 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf213E9Q555 Gm14121-201ENSMUST00000121441 1380 ntBASIC11.27□□□□□ -0.61
Rnf213E9Q555 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf213E9Q555 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf213E9Q555 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf213E9Q555 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf213E9Q555 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Gm29257-201ENSMUST00000186115 639 ntBASIC11.26□□□□□ -0.61
Rnf213E9Q555 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf213E9Q555 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC11.26□□□□□ -0.61
Rnf213E9Q555 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rnf213E9Q555 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC11.25□□□□□ -0.61
Rnf213E9Q555 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.25□□□□□ -0.61
Rnf213E9Q555 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf213E9Q555 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf213E9Q555 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rnf213E9Q555 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Rnf213E9Q555 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.24□□□□□ -0.61
Rnf213E9Q555 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.24□□□□□ -0.61
Rnf213E9Q555 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf213E9Q555 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf213E9Q555 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf213E9Q555 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf213E9Q555 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.23□□□□□ -0.61
Rnf213E9Q555 Gm27454-201ENSMUST00000185090 204 ntBASIC11.23□□□□□ -0.61
Rnf213E9Q555 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.23□□□□□ -0.61
Rnf213E9Q555 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf213E9Q555 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rnf213E9Q555 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf213E9Q555 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf213E9Q555 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf213E9Q555 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf213E9Q555 Gm43445-201ENSMUST00000198564 2091 ntBASIC11.21□□□□□ -0.61
Rnf213E9Q555 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf213E9Q555 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf213E9Q555 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Rnf213E9Q555 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.21□□□□□ -0.62
Rnf213E9Q555 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf213E9Q555 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.21□□□□□ -0.62
Rnf213E9Q555 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf213E9Q555 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf213E9Q555 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf213E9Q555 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf213E9Q555 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf213E9Q555 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf213E9Q555 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf213E9Q555 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms