Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Gm43566-201ENSMUST00000196851 808 ntBASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28729A0A1B0GSW2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Gm28729A0A1B0GSW2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm28729A0A1B0GSW2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm28729A0A1B0GSW2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm45444-201ENSMUST00000211394 898 ntBASIC22.07■■□□□ 1.12
Gm28729A0A1B0GSW2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm28729A0A1B0GSW2 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.06■■□□□ 1.12
Gm28729A0A1B0GSW2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm28729A0A1B0GSW2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28729A0A1B0GSW2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm28729A0A1B0GSW2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28729A0A1B0GSW2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm28729A0A1B0GSW2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.11
Gm28729A0A1B0GSW2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Gm28729A0A1B0GSW2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm7199-201ENSMUST00000118327 1485 ntBASIC22■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22■■□□□ 1.11
Gm28729A0A1B0GSW2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28729A0A1B0GSW2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28729A0A1B0GSW2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28729A0A1B0GSW2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28729A0A1B0GSW2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28729A0A1B0GSW2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Gm28729A0A1B0GSW2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm28729A0A1B0GSW2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28729A0A1B0GSW2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms