Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trav23A0A0G2JG17 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav23A0A0G2JG17 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav23A0A0G2JG17 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav23A0A0G2JG17 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav23A0A0G2JG17 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav23A0A0G2JG17 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trav23A0A0G2JG17 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Trav23A0A0G2JG17 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav23A0A0G2JG17 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav23A0A0G2JG17 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav23A0A0G2JG17 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav23A0A0G2JG17 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav23A0A0G2JG17 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trav23A0A0G2JG17 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Gm27502-201ENSMUST00000183495 199 ntBASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trav23A0A0G2JG17 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav23A0A0G2JG17 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav23A0A0G2JG17 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav23A0A0G2JG17 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav23A0A0G2JG17 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav23A0A0G2JG17 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav23A0A0G2JG17 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav23A0A0G2JG17 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav23A0A0G2JG17 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18■□□□□ 0.47
Trav23A0A0G2JG17 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav23A0A0G2JG17 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav23A0A0G2JG17 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav23A0A0G2JG17 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav23A0A0G2JG17 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav23A0A0G2JG17 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav23A0A0G2JG17 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Cap2-205ENSMUST00000225824 1634 ntBASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms