Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.79■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.79■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.79■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gm9397-201ENSMUST00000200125 605 ntBASIC16.77■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.77■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.77■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3n-3A0A0G2JEM0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.76■□□□□ 0.27
Trav3n-3A0A0G2JEM0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3n-3A0A0G2JEM0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav3n-3A0A0G2JEM0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Particl-201ENSMUST00000205370 1560 ntBASIC16.7■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav3n-3A0A0G2JEM0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav3n-3A0A0G2JEM0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav3n-3A0A0G2JEM0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Trav3n-3A0A0G2JEM0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.65■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav3n-3A0A0G2JEM0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms