Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Gm11175-201ENSMUST00000116172 543 ntBASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv30A0A0B4J1P1 Mir6538-201ENSMUST00000183713 110 ntBASIC16.72■□□□□ 0.27
Trbv30A0A0B4J1P1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Trbv30A0A0B4J1P1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv30A0A0B4J1P1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv30A0A0B4J1P1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv30A0A0B4J1P1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv30A0A0B4J1P1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv30A0A0B4J1P1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv30A0A0B4J1P1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.71■□□□□ 0.27
Trbv30A0A0B4J1P1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv30A0A0B4J1P1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv30A0A0B4J1P1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv30A0A0B4J1P1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv30A0A0B4J1P1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.69■□□□□ 0.26
Trbv30A0A0B4J1P1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv30A0A0B4J1P1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv30A0A0B4J1P1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv30A0A0B4J1P1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm44428-201ENSMUST00000204474 874 ntBASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv30A0A0B4J1P1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv30A0A0B4J1P1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv30A0A0B4J1P1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv30A0A0B4J1P1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv30A0A0B4J1P1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.65■□□□□ 0.26
Trbv30A0A0B4J1P1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv30A0A0B4J1P1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv30A0A0B4J1P1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trbv30A0A0B4J1P1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv30A0A0B4J1P1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv30A0A0B4J1P1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.64■□□□□ 0.25
Trbv30A0A0B4J1P1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trbv30A0A0B4J1P1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv30A0A0B4J1P1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv30A0A0B4J1P1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv30A0A0B4J1P1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv30A0A0B4J1P1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv30A0A0B4J1P1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv30A0A0B4J1P1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv30A0A0B4J1P1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv30A0A0B4J1P1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv30A0A0B4J1P1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv30A0A0B4J1P1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv30A0A0B4J1P1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv30A0A0B4J1P1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv30A0A0B4J1P1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv30A0A0B4J1P1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv30A0A0B4J1P1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv30A0A0B4J1P1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv30A0A0B4J1P1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.6■□□□□ 0.25
Trbv30A0A0B4J1P1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv30A0A0B4J1P1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv30A0A0B4J1P1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv30A0A0B4J1P1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv30A0A0B4J1P1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms