Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv16A0A0B4J1H3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv16A0A0B4J1H3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv16A0A0B4J1H3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv16A0A0B4J1H3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv16A0A0B4J1H3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv16A0A0B4J1H3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv16A0A0B4J1H3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv16A0A0B4J1H3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv16A0A0B4J1H3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv16A0A0B4J1H3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv16A0A0B4J1H3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv16A0A0B4J1H3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv16A0A0B4J1H3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv16A0A0B4J1H3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.09■□□□□ 0.17
Trbv16A0A0B4J1H3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv16A0A0B4J1H3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv16A0A0B4J1H3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv16A0A0B4J1H3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv16A0A0B4J1H3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv16A0A0B4J1H3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trbv16A0A0B4J1H3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv16A0A0B4J1H3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv16A0A0B4J1H3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trbv16A0A0B4J1H3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.06■□□□□ 0.16
Trbv16A0A0B4J1H3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv16A0A0B4J1H3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv16A0A0B4J1H3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv16A0A0B4J1H3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv16A0A0B4J1H3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv16A0A0B4J1H3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Gm6821-201ENSMUST00000107540 542 ntBASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv16A0A0B4J1H3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv16A0A0B4J1H3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv16A0A0B4J1H3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv16A0A0B4J1H3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv16A0A0B4J1H3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.02■□□□□ 0.16
Trbv16A0A0B4J1H3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv16A0A0B4J1H3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv16A0A0B4J1H3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv16A0A0B4J1H3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv16A0A0B4J1H3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.02■□□□□ 0.15
Trbv16A0A0B4J1H3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trbv16A0A0B4J1H3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trbv16A0A0B4J1H3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trbv16A0A0B4J1H3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv16A0A0B4J1H3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv16A0A0B4J1H3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv16A0A0B4J1H3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv16A0A0B4J1H3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms