Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.94■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.93■□□□□ 0.3
Ighv1-52A0A0A6YXC3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.93■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-52A0A0A6YXC3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.88■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.87■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.87■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Gm27502-201ENSMUST00000183495 199 ntBASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Ighv1-52A0A0A6YXC3 Gm14523-201ENSMUST00000117260 558 ntBASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.83■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Gm12366-201ENSMUST00000121722 873 ntBASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ighv1-52A0A0A6YXC3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms