Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm28778A0A087WSK7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28778A0A087WSK7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28778A0A087WSK7 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.15■□□□□ 0.5
Gm28778A0A087WSK7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28778A0A087WSK7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28778A0A087WSK7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28778A0A087WSK7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gm28778A0A087WSK7 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.14■□□□□ 0.5
Gm28778A0A087WSK7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm28778A0A087WSK7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28778A0A087WSK7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.13■□□□□ 0.49
Gm28778A0A087WSK7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm28778A0A087WSK7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28778A0A087WSK7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28778A0A087WSK7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gm28778A0A087WSK7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28778A0A087WSK7 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.12■□□□□ 0.49
Gm28778A0A087WSK7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Gm28778A0A087WSK7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28778A0A087WSK7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28778A0A087WSK7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28778A0A087WSK7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gm28778A0A087WSK7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28778A0A087WSK7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28778A0A087WSK7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm28778A0A087WSK7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28778A0A087WSK7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28778A0A087WSK7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28778A0A087WSK7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Gm27502-201ENSMUST00000183495 199 ntBASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28778A0A087WSK7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Gm28778A0A087WSK7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm28778A0A087WSK7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28778A0A087WSK7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28778A0A087WSK7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28778A0A087WSK7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28778A0A087WSK7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28778A0A087WSK7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Gm28778A0A087WSK7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28778A0A087WSK7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm28778A0A087WSK7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28778A0A087WSK7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28778A0A087WSK7 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.04■□□□□ 0.48
Gm28778A0A087WSK7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28778A0A087WSK7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Gm28778A0A087WSK7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Gm14523-201ENSMUST00000117260 558 ntBASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm28778A0A087WSK7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28778A0A087WSK7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28778A0A087WSK7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm28778A0A087WSK7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28778A0A087WSK7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28778A0A087WSK7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm28778A0A087WSK7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm28778A0A087WSK7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Gm7332-201ENSMUST00000118351 454 ntBASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Gm12366-201ENSMUST00000121722 873 ntBASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Gm5786-201ENSMUST00000085368 882 ntBASIC18■□□□□ 0.47
Gm28778A0A087WSK7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm28778A0A087WSK7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28778A0A087WSK7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms