Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3-4A0A075B654 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3-4A0A075B654 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3-4A0A075B654 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-4A0A075B654 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-4A0A075B654 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-4A0A075B654 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-4A0A075B654 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-4A0A075B654 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Trav3-4A0A075B654 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trav3-4A0A075B654 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-4A0A075B654 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-4A0A075B654 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav3-4A0A075B654 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav3-4A0A075B654 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-4A0A075B654 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-4A0A075B654 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-4A0A075B654 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav3-4A0A075B654 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-4A0A075B654 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-4A0A075B654 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav3-4A0A075B654 Gm27322-201ENSMUST00000184007 104 ntBASIC14.93□□□□□ -0.02
Trav3-4A0A075B654 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-4A0A075B654 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-4A0A075B654 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-4A0A075B654 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-4A0A075B654 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trav3-4A0A075B654 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 750.6 ms