Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Gm8503-201ENSMUST00000118131 455 ntBASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav9n-4A0A075B631 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-4A0A075B631 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-4A0A075B631 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav9n-4A0A075B631 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-4A0A075B631 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9n-4A0A075B631 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-4A0A075B631 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav9n-4A0A075B631 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav9n-4A0A075B631 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav9n-4A0A075B631 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9n-4A0A075B631 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Trav9n-4A0A075B631 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9n-4A0A075B631 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9n-4A0A075B631 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-4A0A075B631 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-4A0A075B631 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-4A0A075B631 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-4A0A075B631 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9n-4A0A075B631 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav9n-4A0A075B631 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-4A0A075B631 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-4A0A075B631 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9n-4A0A075B631 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav9n-4A0A075B631 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9n-4A0A075B631 Gm4799-201ENSMUST00000095396 657 ntBASIC15.09■□□□□ 0.01
Trav9n-4A0A075B631 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9n-4A0A075B631 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9n-4A0A075B631 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav9n-4A0A075B631 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-4A0A075B631 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9n-4A0A075B631 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.07■□□□□ 0
Trav9n-4A0A075B631 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9n-4A0A075B631 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav9n-4A0A075B631 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9n-4A0A075B631 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav9n-4A0A075B631 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9n-4A0A075B631 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-4A0A075B631 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.05■□□□□ -0
Trav9n-4A0A075B631 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-4A0A075B631 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9n-4A0A075B631 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-4A0A075B631 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav9n-4A0A075B631 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav9n-4A0A075B631 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.04■□□□□ -0
Trav9n-4A0A075B631 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-4A0A075B631 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9n-4A0A075B631 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms