Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC26.24■■□□□ 1.79
Rtl1Q7M732 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Rtl1Q7M732 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Gm15653-201ENSMUST00000119247 907 ntBASIC26.23■■□□□ 1.79
Rtl1Q7M732 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Gm14042-201ENSMUST00000120139 833 ntBASIC26.23■■□□□ 1.79
Rtl1Q7M732 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Rtl1Q7M732 AC125206.2-201ENSMUST00000217454 574 ntBASIC26.23■■□□□ 1.79
Rtl1Q7M732 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Gm2423-201ENSMUST00000074863 733 ntBASIC26.23■■□□□ 1.79
Rtl1Q7M732 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtl1Q7M732 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Gm22189-201ENSMUST00000103822 86 ntBASIC26.22■■□□□ 1.79
Rtl1Q7M732 Gm3436-201ENSMUST00000179930 840 ntBASIC26.22■■□□□ 1.79
Rtl1Q7M732 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rtl1Q7M732 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Rtl1Q7M732 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Rtl1Q7M732 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtl1Q7M732 Gm27631-201ENSMUST00000184163 466 ntBASIC26.21■■□□□ 1.79
Rtl1Q7M732 Gm7730-201ENSMUST00000212486 454 ntBASIC26.21■■□□□ 1.79
Rtl1Q7M732 CT025535.1-201ENSMUST00000227172 491 ntBASIC26.21■■□□□ 1.79
Rtl1Q7M732 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtl1Q7M732 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtl1Q7M732 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC26.21■■□□□ 1.79
Rtl1Q7M732 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtl1Q7M732 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtl1Q7M732 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rtl1Q7M732 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC26.2■■□□□ 1.79
Rtl1Q7M732 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC26.2■■□□□ 1.79
Rtl1Q7M732 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Rtl1Q7M732 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Rtl1Q7M732 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Rtl1Q7M732 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtl1Q7M732 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Rtl1Q7M732 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtl1Q7M732 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtl1Q7M732 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Gm27306-201ENSMUST00000183970 107 ntBASIC26.19■■□□□ 1.78
Rtl1Q7M732 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rtl1Q7M732 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 Gm44981-201ENSMUST00000205549 1943 ntBASIC26.18■■□□□ 1.78
Rtl1Q7M732 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtl1Q7M732 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms