Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
H2afb1S4R1E0 Gm6821-201ENSMUST00000107540 542 ntBASIC20.26■□□□□ 0.83
H2afb1S4R1E0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.26■□□□□ 0.83
H2afb1S4R1E0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2afb1S4R1E0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
H2afb1S4R1E0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb1S4R1E0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb1S4R1E0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.24■□□□□ 0.83
H2afb1S4R1E0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1S4R1E0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1S4R1E0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
H2afb1S4R1E0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1S4R1E0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.23■□□□□ 0.83
H2afb1S4R1E0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1S4R1E0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb1S4R1E0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb1S4R1E0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb1S4R1E0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb1S4R1E0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
H2afb1S4R1E0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.21■□□□□ 0.83
H2afb1S4R1E0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb1S4R1E0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb1S4R1E0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
H2afb1S4R1E0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb1S4R1E0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb1S4R1E0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb1S4R1E0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb1S4R1E0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb1S4R1E0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb1S4R1E0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb1S4R1E0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb1S4R1E0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb1S4R1E0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb1S4R1E0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.17■□□□□ 0.82
H2afb1S4R1E0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb1S4R1E0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb1S4R1E0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb1S4R1E0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb1S4R1E0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb1S4R1E0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb1S4R1E0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb1S4R1E0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb1S4R1E0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb1S4R1E0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
H2afb1S4R1E0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb1S4R1E0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.15■□□□□ 0.82
H2afb1S4R1E0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb1S4R1E0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.15■□□□□ 0.82
H2afb1S4R1E0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb1S4R1E0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb1S4R1E0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb1S4R1E0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb1S4R1E0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb1S4R1E0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
H2afb1S4R1E0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb1S4R1E0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb1S4R1E0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb1S4R1E0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb1S4R1E0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb1S4R1E0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb1S4R1E0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb1S4R1E0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb1S4R1E0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
H2afb1S4R1E0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1S4R1E0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1S4R1E0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1S4R1E0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb1S4R1E0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
H2afb1S4R1E0 Gm8503-201ENSMUST00000118131 455 ntBASIC20.09■□□□□ 0.81
H2afb1S4R1E0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.09■□□□□ 0.81
H2afb1S4R1E0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.09■□□□□ 0.81
H2afb1S4R1E0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb1S4R1E0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H2afb1S4R1E0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.08■□□□□ 0.8
H2afb1S4R1E0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H2afb1S4R1E0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb1S4R1E0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms