Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssna1Q9JJ94 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssna1Q9JJ94 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssna1Q9JJ94 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssna1Q9JJ94 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssna1Q9JJ94 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.44■□□□□ 0.54
Ssna1Q9JJ94 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ssna1Q9JJ94 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssna1Q9JJ94 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ssna1Q9JJ94 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ssna1Q9JJ94 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssna1Q9JJ94 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ssna1Q9JJ94 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ssna1Q9JJ94 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssna1Q9JJ94 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssna1Q9JJ94 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssna1Q9JJ94 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.39■□□□□ 0.53
Ssna1Q9JJ94 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Ssna1Q9JJ94 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.39■□□□□ 0.53
Ssna1Q9JJ94 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssna1Q9JJ94 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssna1Q9JJ94 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.38■□□□□ 0.53
Ssna1Q9JJ94 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Ssna1Q9JJ94 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssna1Q9JJ94 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssna1Q9JJ94 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssna1Q9JJ94 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssna1Q9JJ94 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ssna1Q9JJ94 Rab21-202ENSMUST00000218831 843 ntBASIC18.37■□□□□ 0.53
Ssna1Q9JJ94 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssna1Q9JJ94 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssna1Q9JJ94 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssna1Q9JJ94 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssna1Q9JJ94 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssna1Q9JJ94 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssna1Q9JJ94 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssna1Q9JJ94 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssna1Q9JJ94 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssna1Q9JJ94 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssna1Q9JJ94 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ssna1Q9JJ94 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.33■□□□□ 0.52
Ssna1Q9JJ94 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssna1Q9JJ94 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssna1Q9JJ94 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssna1Q9JJ94 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssna1Q9JJ94 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssna1Q9JJ94 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.3■□□□□ 0.52
Ssna1Q9JJ94 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssna1Q9JJ94 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ssna1Q9JJ94 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssna1Q9JJ94 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssna1Q9JJ94 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ssna1Q9JJ94 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssna1Q9JJ94 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms