Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20aQ9DC33 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20aQ9DC33 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20aQ9DC33 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hmg20aQ9DC33 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.53■□□□□ 0.88
Hmg20aQ9DC33 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Hmg20aQ9DC33 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20aQ9DC33 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20aQ9DC33 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20aQ9DC33 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20aQ9DC33 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Hmg20aQ9DC33 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20aQ9DC33 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20aQ9DC33 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20aQ9DC33 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hmg20aQ9DC33 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Hmg20aQ9DC33 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20aQ9DC33 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20aQ9DC33 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20aQ9DC33 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20aQ9DC33 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20aQ9DC33 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20aQ9DC33 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmg20aQ9DC33 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmg20aQ9DC33 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmg20aQ9DC33 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmg20aQ9DC33 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmg20aQ9DC33 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmg20aQ9DC33 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmg20aQ9DC33 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hmg20aQ9DC33 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmg20aQ9DC33 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmg20aQ9DC33 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmg20aQ9DC33 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmg20aQ9DC33 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hmg20aQ9DC33 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmg20aQ9DC33 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmg20aQ9DC33 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20aQ9DC33 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20aQ9DC33 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20aQ9DC33 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20aQ9DC33 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmg20aQ9DC33 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Hmg20aQ9DC33 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20aQ9DC33 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmg20aQ9DC33 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Hmg20aQ9DC33 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Hmg20aQ9DC33 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hmg20aQ9DC33 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Hmg20aQ9DC33 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmg20aQ9DC33 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms