Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShpkQ9D5J6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ShpkQ9D5J6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ShpkQ9D5J6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShpkQ9D5J6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
ShpkQ9D5J6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShpkQ9D5J6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ShpkQ9D5J6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShpkQ9D5J6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShpkQ9D5J6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShpkQ9D5J6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ShpkQ9D5J6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShpkQ9D5J6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ShpkQ9D5J6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShpkQ9D5J6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShpkQ9D5J6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ShpkQ9D5J6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShpkQ9D5J6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShpkQ9D5J6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ShpkQ9D5J6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShpkQ9D5J6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ShpkQ9D5J6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ShpkQ9D5J6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShpkQ9D5J6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShpkQ9D5J6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShpkQ9D5J6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ShpkQ9D5J6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.84■□□□□ 0.61
ShpkQ9D5J6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
ShpkQ9D5J6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.83■□□□□ 0.61
ShpkQ9D5J6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ShpkQ9D5J6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ShpkQ9D5J6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ShpkQ9D5J6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShpkQ9D5J6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShpkQ9D5J6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShpkQ9D5J6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShpkQ9D5J6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShpkQ9D5J6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ShpkQ9D5J6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ShpkQ9D5J6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ShpkQ9D5J6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Notumos-201ENSMUST00000151998 2659 ntBASIC18.76■□□□□ 0.59
ShpkQ9D5J6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShpkQ9D5J6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShpkQ9D5J6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ShpkQ9D5J6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShpkQ9D5J6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShpkQ9D5J6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShpkQ9D5J6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShpkQ9D5J6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShpkQ9D5J6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms