Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vps28Q9D1C8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vps28Q9D1C8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vps28Q9D1C8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.02■■□□□ 1.28
Vps28Q9D1C8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Gm27502-201ENSMUST00000183495 199 ntBASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps28Q9D1C8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23■■□□□ 1.27
Vps28Q9D1C8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23■■□□□ 1.27
Vps28Q9D1C8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23■■□□□ 1.27
Vps28Q9D1C8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Vps28Q9D1C8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vps28Q9D1C8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vps28Q9D1C8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.99■■□□□ 1.27
Vps28Q9D1C8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vps28Q9D1C8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Gm12366-201ENSMUST00000121722 873 ntBASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Gm5786-201ENSMUST00000085368 882 ntBASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps28Q9D1C8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps28Q9D1C8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vps28Q9D1C8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Vps28Q9D1C8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vps28Q9D1C8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vps28Q9D1C8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vps28Q9D1C8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
Vps28Q9D1C8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Vps28Q9D1C8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.94■■□□□ 1.26
Vps28Q9D1C8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps28Q9D1C8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
Vps28Q9D1C8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps28Q9D1C8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vps28Q9D1C8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.92■■□□□ 1.26
Vps28Q9D1C8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vps28Q9D1C8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vps28Q9D1C8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.91■■□□□ 1.26
Vps28Q9D1C8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Vps28Q9D1C8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vps28Q9D1C8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vps28Q9D1C8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.9■■□□□ 1.26
Vps28Q9D1C8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Vps28Q9D1C8 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.9■■□□□ 1.26
Vps28Q9D1C8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps28Q9D1C8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps28Q9D1C8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps28Q9D1C8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Vps28Q9D1C8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
Vps28Q9D1C8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Vps28Q9D1C8 Gm14523-201ENSMUST00000117260 558 ntBASIC22.88■■□□□ 1.25
Vps28Q9D1C8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps28Q9D1C8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps28Q9D1C8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps28Q9D1C8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vps28Q9D1C8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vps28Q9D1C8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vps28Q9D1C8 Gm7332-201ENSMUST00000118351 454 ntBASIC22.86■■□□□ 1.25
Vps28Q9D1C8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.86■■□□□ 1.25
Vps28Q9D1C8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Vps28Q9D1C8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Vps28Q9D1C8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vps28Q9D1C8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Vps28Q9D1C8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Vps28Q9D1C8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Vps28Q9D1C8 Gm44428-201ENSMUST00000204474 874 ntBASIC22.85■■□□□ 1.25
Vps28Q9D1C8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms