Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkiras2Q9CR56 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkiras2Q9CR56 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkiras2Q9CR56 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkiras2Q9CR56 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkiras2Q9CR56 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkiras2Q9CR56 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkiras2Q9CR56 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkiras2Q9CR56 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkiras2Q9CR56 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkiras2Q9CR56 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkiras2Q9CR56 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nkiras2Q9CR56 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Nkiras2Q9CR56 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nkiras2Q9CR56 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nkiras2Q9CR56 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nkiras2Q9CR56 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkiras2Q9CR56 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkiras2Q9CR56 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkiras2Q9CR56 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nkiras2Q9CR56 Particl-201ENSMUST00000205370 1560 ntBASIC20.07■□□□□ 0.8
Nkiras2Q9CR56 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nkiras2Q9CR56 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.07■□□□□ 0.8
Nkiras2Q9CR56 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nkiras2Q9CR56 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nkiras2Q9CR56 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.06■□□□□ 0.8
Nkiras2Q9CR56 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nkiras2Q9CR56 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkiras2Q9CR56 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkiras2Q9CR56 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Nkiras2Q9CR56 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.05■□□□□ 0.8
Nkiras2Q9CR56 Gm7432-201ENSMUST00000210343 879 ntBASIC20.05■□□□□ 0.8
Nkiras2Q9CR56 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nkiras2Q9CR56 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkiras2Q9CR56 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkiras2Q9CR56 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkiras2Q9CR56 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkiras2Q9CR56 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkiras2Q9CR56 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkiras2Q9CR56 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkiras2Q9CR56 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
Nkiras2Q9CR56 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkiras2Q9CR56 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkiras2Q9CR56 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nkiras2Q9CR56 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nkiras2Q9CR56 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nkiras2Q9CR56 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nkiras2Q9CR56 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkiras2Q9CR56 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkiras2Q9CR56 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20■□□□□ 0.79
Nkiras2Q9CR56 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20■□□□□ 0.79
Nkiras2Q9CR56 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20■□□□□ 0.79
Nkiras2Q9CR56 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Nkiras2Q9CR56 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkiras2Q9CR56 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkiras2Q9CR56 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkiras2Q9CR56 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkiras2Q9CR56 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkiras2Q9CR56 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nkiras2Q9CR56 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkiras2Q9CR56 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkiras2Q9CR56 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkiras2Q9CR56 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkiras2Q9CR56 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nkiras2Q9CR56 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nkiras2Q9CR56 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkiras2Q9CR56 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkiras2Q9CR56 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkiras2Q9CR56 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkiras2Q9CR56 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms