Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha11Q91Y19 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha11Q91Y19 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdha11Q91Y19 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha11Q91Y19 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdha11Q91Y19 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Pcdha11Q91Y19 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdha11Q91Y19 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha11Q91Y19 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha11Q91Y19 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Pcdha11Q91Y19 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.72■■□□□ 1.39
Pcdha11Q91Y19 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.72■■□□□ 1.39
Pcdha11Q91Y19 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdha11Q91Y19 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha11Q91Y19 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha11Q91Y19 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha11Q91Y19 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha11Q91Y19 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Pcdha11Q91Y19 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.7■■□□□ 1.38
Pcdha11Q91Y19 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pcdha11Q91Y19 Gm14523-201ENSMUST00000117260 558 ntBASIC23.69■■□□□ 1.38
Pcdha11Q91Y19 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha11Q91Y19 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha11Q91Y19 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha11Q91Y19 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Pcdha11Q91Y19 Gm44428-201ENSMUST00000204474 874 ntBASIC23.68■■□□□ 1.38
Pcdha11Q91Y19 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Pcdha11Q91Y19 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha11Q91Y19 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
Pcdha11Q91Y19 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Pcdha11Q91Y19 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdha11Q91Y19 Gm7332-201ENSMUST00000118351 454 ntBASIC23.67■■□□□ 1.38
Pcdha11Q91Y19 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.67■■□□□ 1.38
Pcdha11Q91Y19 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdha11Q91Y19 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha11Q91Y19 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha11Q91Y19 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha11Q91Y19 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha11Q91Y19 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha11Q91Y19 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha11Q91Y19 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha11Q91Y19 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha11Q91Y19 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdha11Q91Y19 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha11Q91Y19 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.63■■□□□ 1.37
Pcdha11Q91Y19 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha11Q91Y19 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdha11Q91Y19 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdha11Q91Y19 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha11Q91Y19 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdha11Q91Y19 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdha11Q91Y19 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha11Q91Y19 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha11Q91Y19 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.59■■□□□ 1.37
Pcdha11Q91Y19 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.59■■□□□ 1.37
Pcdha11Q91Y19 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha11Q91Y19 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdha11Q91Y19 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdha11Q91Y19 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Pcdha11Q91Y19 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.58■■□□□ 1.37
Pcdha11Q91Y19 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdha11Q91Y19 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdha11Q91Y19 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha11Q91Y19 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha11Q91Y19 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha11Q91Y19 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdha11Q91Y19 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdha11Q91Y19 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha11Q91Y19 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdha11Q91Y19 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.54■■□□□ 1.36
Pcdha11Q91Y19 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pcdha11Q91Y19 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdha11Q91Y19 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdha11Q91Y19 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdha11Q91Y19 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdha11Q91Y19 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha11Q91Y19 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Pcdha11Q91Y19 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.52■■□□□ 1.36
Pcdha11Q91Y19 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha11Q91Y19 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha11Q91Y19 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.51■■□□□ 1.35
Pcdha11Q91Y19 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha11Q91Y19 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha11Q91Y19 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha11Q91Y19 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdha11Q91Y19 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha11Q91Y19 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Pcdha11Q91Y19 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdha11Q91Y19 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.5■■□□□ 1.35
Pcdha11Q91Y19 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.5■■□□□ 1.35
Pcdha11Q91Y19 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms