Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdha3Q91Y16 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Pcdha3Q91Y16 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdha3Q91Y16 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdha3Q91Y16 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdha3Q91Y16 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Pcdha3Q91Y16 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha3Q91Y16 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha3Q91Y16 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha3Q91Y16 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdha3Q91Y16 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
Pcdha3Q91Y16 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha3Q91Y16 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha3Q91Y16 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha3Q91Y16 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdha3Q91Y16 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.5■■□□□ 1.35
Pcdha3Q91Y16 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdha3Q91Y16 Gm9806-201ENSMUST00000051080 552 ntBASIC23.5■■□□□ 1.35
Pcdha3Q91Y16 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdha3Q91Y16 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Gm11175-201ENSMUST00000116172 543 ntBASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Scarna2-201ENSMUST00000157560 414 ntBASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdha3Q91Y16 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Pcdha3Q91Y16 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdha3Q91Y16 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Pcdha3Q91Y16 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdha3Q91Y16 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdha3Q91Y16 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdha3Q91Y16 Gm11687-201ENSMUST00000118911 886 ntBASIC23.47■■□□□ 1.35
Pcdha3Q91Y16 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdha3Q91Y16 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdha3Q91Y16 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdha3Q91Y16 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdha3Q91Y16 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdha3Q91Y16 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Pcdha3Q91Y16 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.45■■□□□ 1.34
Pcdha3Q91Y16 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdha3Q91Y16 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Pcdha3Q91Y16 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Pcdha3Q91Y16 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Pcdha3Q91Y16 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdha3Q91Y16 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdha3Q91Y16 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdha3Q91Y16 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdha3Q91Y16 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Pcdha3Q91Y16 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdha3Q91Y16 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.41■■□□□ 1.34
Pcdha3Q91Y16 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Pcdha3Q91Y16 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdha3Q91Y16 Gm16437-201ENSMUST00000025669 507 ntBASIC23.4■■□□□ 1.34
Pcdha3Q91Y16 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdha3Q91Y16 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdha3Q91Y16 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdha3Q91Y16 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdha3Q91Y16 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdha3Q91Y16 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Pcdha3Q91Y16 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.39■■□□□ 1.33
Pcdha3Q91Y16 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdha3Q91Y16 Terc-201ENSMUST00000082862 423 ntBASIC23.38■■□□□ 1.33
Pcdha3Q91Y16 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Pcdha3Q91Y16 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdha3Q91Y16 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdha3Q91Y16 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Pcdha3Q91Y16 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Pcdha3Q91Y16 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdha3Q91Y16 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdha3Q91Y16 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.37■■□□□ 1.33
Pcdha3Q91Y16 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
Pcdha3Q91Y16 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdha3Q91Y16 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdha3Q91Y16 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.36■■□□□ 1.33
Pcdha3Q91Y16 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdha3Q91Y16 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdha3Q91Y16 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.35■■□□□ 1.33
Pcdha3Q91Y16 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdha3Q91Y16 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Pcdha3Q91Y16 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdha3Q91Y16 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdha3Q91Y16 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.34■■□□□ 1.33
Pcdha3Q91Y16 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdha3Q91Y16 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdha3Q91Y16 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdha3Q91Y16 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdha3Q91Y16 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.33■■□□□ 1.32
Pcdha3Q91Y16 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdha3Q91Y16 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.32■■□□□ 1.32
Pcdha3Q91Y16 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdha3Q91Y16 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms