Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb4Q91XZ6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.27■■□□□ 1.16
Pcdhb4Q91XZ6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhb4Q91XZ6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb4Q91XZ6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb4Q91XZ6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb4Q91XZ6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb4Q91XZ6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb4Q91XZ6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb4Q91XZ6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb4Q91XZ6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb4Q91XZ6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb4Q91XZ6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb4Q91XZ6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb4Q91XZ6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb4Q91XZ6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb4Q91XZ6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb4Q91XZ6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb4Q91XZ6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Pcdhb4Q91XZ6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb4Q91XZ6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
Pcdhb4Q91XZ6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb4Q91XZ6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb4Q91XZ6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Pcdhb4Q91XZ6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb4Q91XZ6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb4Q91XZ6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Gm7432-201ENSMUST00000210343 879 ntBASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb4Q91XZ6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Gm4799-201ENSMUST00000095396 657 ntBASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb4Q91XZ6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhb4Q91XZ6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhb4Q91XZ6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb4Q91XZ6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms