Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim60Q8VI40 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Trim60Q8VI40 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim60Q8VI40 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim60Q8VI40 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim60Q8VI40 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim60Q8VI40 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim60Q8VI40 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim60Q8VI40 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim60Q8VI40 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim60Q8VI40 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim60Q8VI40 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim60Q8VI40 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim60Q8VI40 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim60Q8VI40 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim60Q8VI40 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim60Q8VI40 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.17■■□□□ 1.3
Trim60Q8VI40 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim60Q8VI40 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim60Q8VI40 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim60Q8VI40 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim60Q8VI40 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Trim60Q8VI40 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim60Q8VI40 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim60Q8VI40 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim60Q8VI40 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Trim60Q8VI40 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim60Q8VI40 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim60Q8VI40 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.15■■□□□ 1.3
Trim60Q8VI40 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim60Q8VI40 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim60Q8VI40 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Trim60Q8VI40 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Trim60Q8VI40 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim60Q8VI40 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim60Q8VI40 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim60Q8VI40 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim60Q8VI40 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim60Q8VI40 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim60Q8VI40 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim60Q8VI40 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Trim60Q8VI40 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim60Q8VI40 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim60Q8VI40 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim60Q8VI40 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim60Q8VI40 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.1■■□□□ 1.29
Trim60Q8VI40 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Trim60Q8VI40 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim60Q8VI40 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim60Q8VI40 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.09■■□□□ 1.29
Trim60Q8VI40 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim60Q8VI40 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim60Q8VI40 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim60Q8VI40 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Trim60Q8VI40 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim60Q8VI40 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim60Q8VI40 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Trim60Q8VI40 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.08■■□□□ 1.28
Trim60Q8VI40 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim60Q8VI40 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.07■■□□□ 1.28
Trim60Q8VI40 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Trim60Q8VI40 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.06■■□□□ 1.28
Trim60Q8VI40 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim60Q8VI40 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim60Q8VI40 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.06■■□□□ 1.28
Trim60Q8VI40 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim60Q8VI40 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Trim60Q8VI40 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim60Q8VI40 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim60Q8VI40 Gm8503-201ENSMUST00000118131 455 ntBASIC23.05■■□□□ 1.28
Trim60Q8VI40 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.05■■□□□ 1.28
Trim60Q8VI40 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
Trim60Q8VI40 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim60Q8VI40 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim60Q8VI40 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim60Q8VI40 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim60Q8VI40 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim60Q8VI40 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim60Q8VI40 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.04■■□□□ 1.28
Trim60Q8VI40 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim60Q8VI40 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Trim60Q8VI40 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim60Q8VI40 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Trim60Q8VI40 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim60Q8VI40 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim60Q8VI40 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.02■■□□□ 1.28
Trim60Q8VI40 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim60Q8VI40 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim60Q8VI40 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim60Q8VI40 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim60Q8VI40 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim60Q8VI40 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim60Q8VI40 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Trim60Q8VI40 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim60Q8VI40 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim60Q8VI40 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim60Q8VI40 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim60Q8VI40 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Trim60Q8VI40 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim60Q8VI40 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms