Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cspg4Q8VHY0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cspg4Q8VHY0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cspg4Q8VHY0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cspg4Q8VHY0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.82■□□□□ 0.76
Cspg4Q8VHY0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.82■□□□□ 0.76
Cspg4Q8VHY0 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.81■□□□□ 0.76
Cspg4Q8VHY0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cspg4Q8VHY0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cspg4Q8VHY0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cspg4Q8VHY0 Gm13241-201ENSMUST00000094493 780 ntBASIC19.8■□□□□ 0.76
Cspg4Q8VHY0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg4Q8VHY0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg4Q8VHY0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg4Q8VHY0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cspg4Q8VHY0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cspg4Q8VHY0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cspg4Q8VHY0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.77■□□□□ 0.76
Cspg4Q8VHY0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cspg4Q8VHY0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg4Q8VHY0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg4Q8VHY0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cspg4Q8VHY0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
Cspg4Q8VHY0 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.75■□□□□ 0.75
Cspg4Q8VHY0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg4Q8VHY0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cspg4Q8VHY0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cspg4Q8VHY0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.73■□□□□ 0.75
Cspg4Q8VHY0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cspg4Q8VHY0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Cspg4Q8VHY0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Cspg4Q8VHY0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg4Q8VHY0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg4Q8VHY0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cspg4Q8VHY0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.7■□□□□ 0.74
Cspg4Q8VHY0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.7■□□□□ 0.74
Cspg4Q8VHY0 Zxda-201ENSMUST00000117281 2621 ntBASIC19.69■□□□□ 0.74
Cspg4Q8VHY0 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.69■□□□□ 0.74
Cspg4Q8VHY0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg4Q8VHY0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cspg4Q8VHY0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cspg4Q8VHY0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cspg4Q8VHY0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cspg4Q8VHY0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.67■□□□□ 0.74
Cspg4Q8VHY0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cspg4Q8VHY0 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.67■□□□□ 0.74
Cspg4Q8VHY0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cspg4Q8VHY0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Gm21956-201ENSMUST00000179946 522 ntBASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.65■□□□□ 0.74
Cspg4Q8VHY0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.64■□□□□ 0.74
Cspg4Q8VHY0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cspg4Q8VHY0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cspg4Q8VHY0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.63■□□□□ 0.73
Cspg4Q8VHY0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.63■□□□□ 0.73
Cspg4Q8VHY0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cspg4Q8VHY0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cspg4Q8VHY0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cspg4Q8VHY0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cspg4Q8VHY0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cspg4Q8VHY0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cspg4Q8VHY0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.6■□□□□ 0.73
Cspg4Q8VHY0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cspg4Q8VHY0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cspg4Q8VHY0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.6■□□□□ 0.73
Cspg4Q8VHY0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cspg4Q8VHY0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.59■□□□□ 0.73
Cspg4Q8VHY0 Etf1-202ENSMUST00000180351 108 ntBASIC19.59■□□□□ 0.73
Cspg4Q8VHY0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cspg4Q8VHY0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 229.5 ms