Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdhr1Q8VHP6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdhr1Q8VHP6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cdhr1Q8VHP6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Cdhr1Q8VHP6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr1Q8VHP6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr1Q8VHP6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Gm5921-201ENSMUST00000075898 882 ntBASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Cdhr1Q8VHP6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdhr1Q8VHP6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.94■■□□□ 1.1
Cdhr1Q8VHP6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdhr1Q8VHP6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.93■■□□□ 1.1
Cdhr1Q8VHP6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdhr1Q8VHP6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Cdhr1Q8VHP6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Cdhr1Q8VHP6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdhr1Q8VHP6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cdhr1Q8VHP6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Cdhr1Q8VHP6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cdhr1Q8VHP6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr1Q8VHP6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr1Q8VHP6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Cdhr1Q8VHP6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdhr1Q8VHP6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdhr1Q8VHP6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr1Q8VHP6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr1Q8VHP6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr1Q8VHP6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr1Q8VHP6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdhr1Q8VHP6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdhr1Q8VHP6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.83■■□□□ 1.08
Cdhr1Q8VHP6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdhr1Q8VHP6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdhr1Q8VHP6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdhr1Q8VHP6 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.8■■□□□ 1.08
Cdhr1Q8VHP6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr1Q8VHP6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr1Q8VHP6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms