Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdt1Q8R4E9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.7■■□□□ 1.06
Cdt1Q8R4E9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdt1Q8R4E9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdt1Q8R4E9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdt1Q8R4E9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdt1Q8R4E9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdt1Q8R4E9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdt1Q8R4E9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdt1Q8R4E9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdt1Q8R4E9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdt1Q8R4E9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cdt1Q8R4E9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdt1Q8R4E9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdt1Q8R4E9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdt1Q8R4E9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.67■■□□□ 1.06
Cdt1Q8R4E9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.67■■□□□ 1.06
Cdt1Q8R4E9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdt1Q8R4E9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdt1Q8R4E9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdt1Q8R4E9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdt1Q8R4E9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdt1Q8R4E9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdt1Q8R4E9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cdt1Q8R4E9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdt1Q8R4E9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.64■■□□□ 1.05
Cdt1Q8R4E9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.64■■□□□ 1.05
Cdt1Q8R4E9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdt1Q8R4E9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdt1Q8R4E9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdt1Q8R4E9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cdt1Q8R4E9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdt1Q8R4E9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdt1Q8R4E9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdt1Q8R4E9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdt1Q8R4E9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdt1Q8R4E9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdt1Q8R4E9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.61■■□□□ 1.05
Cdt1Q8R4E9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdt1Q8R4E9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cdt1Q8R4E9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
Cdt1Q8R4E9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.59■■□□□ 1.05
Cdt1Q8R4E9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdt1Q8R4E9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.59■■□□□ 1.05
Cdt1Q8R4E9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdt1Q8R4E9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdt1Q8R4E9 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.58■■□□□ 1.05
Cdt1Q8R4E9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.58■■□□□ 1.05
Cdt1Q8R4E9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdt1Q8R4E9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cdt1Q8R4E9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdt1Q8R4E9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cdt1Q8R4E9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cdt1Q8R4E9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdt1Q8R4E9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdt1Q8R4E9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdt1Q8R4E9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdt1Q8R4E9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cdt1Q8R4E9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdt1Q8R4E9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdt1Q8R4E9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.56■■□□□ 1.04
Cdt1Q8R4E9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdt1Q8R4E9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdt1Q8R4E9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdt1Q8R4E9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdt1Q8R4E9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.55■■□□□ 1.04
Cdt1Q8R4E9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.55■■□□□ 1.04
Cdt1Q8R4E9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdt1Q8R4E9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdt1Q8R4E9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdt1Q8R4E9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdt1Q8R4E9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.52■■□□□ 1.04
Cdt1Q8R4E9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdt1Q8R4E9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cdt1Q8R4E9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdt1Q8R4E9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdt1Q8R4E9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdt1Q8R4E9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Cdt1Q8R4E9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.5■■□□□ 1.03
Cdt1Q8R4E9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdt1Q8R4E9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms