Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmn1r228Q8R2A7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vmn1r228Q8R2A7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmn1r228Q8R2A7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Vmn1r228Q8R2A7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Gm8109-201ENSMUST00000194076 746 ntBASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.54■□□□□ 0.72
Vmn1r228Q8R2A7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r228Q8R2A7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r228Q8R2A7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r228Q8R2A7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r228Q8R2A7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vmn1r228Q8R2A7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r228Q8R2A7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vmn1r228Q8R2A7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r228Q8R2A7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r228Q8R2A7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r228Q8R2A7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r228Q8R2A7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r228Q8R2A7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r228Q8R2A7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vmn1r228Q8R2A7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vmn1r228Q8R2A7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r228Q8R2A7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r228Q8R2A7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r228Q8R2A7 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.49■□□□□ 0.71
Vmn1r228Q8R2A7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.49■□□□□ 0.71
Vmn1r228Q8R2A7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r228Q8R2A7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r228Q8R2A7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Vmn1r228Q8R2A7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r228Q8R2A7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r228Q8R2A7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.46■□□□□ 0.71
Vmn1r228Q8R2A7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r228Q8R2A7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r228Q8R2A7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.44■□□□□ 0.7
Vmn1r228Q8R2A7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r228Q8R2A7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r228Q8R2A7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r228Q8R2A7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r228Q8R2A7 Gm30023-201ENSMUST00000197970 889 ntBASIC19.43■□□□□ 0.7
Vmn1r228Q8R2A7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r228Q8R2A7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vmn1r228Q8R2A7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r228Q8R2A7 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.42■□□□□ 0.7
Vmn1r228Q8R2A7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Vmn1r228Q8R2A7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r228Q8R2A7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r228Q8R2A7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r228Q8R2A7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r228Q8R2A7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.41■□□□□ 0.7
Vmn1r228Q8R2A7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vmn1r228Q8R2A7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vmn1r228Q8R2A7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r228Q8R2A7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r228Q8R2A7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r228Q8R2A7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r228Q8R2A7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r228Q8R2A7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r228Q8R2A7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r228Q8R2A7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r228Q8R2A7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r228Q8R2A7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Vmn1r228Q8R2A7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms