Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpp40Q8R1F9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpp40Q8R1F9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpp40Q8R1F9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp40Q8R1F9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpp40Q8R1F9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Rpp40Q8R1F9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.27■■□□□ 1.48
Rpp40Q8R1F9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rpp40Q8R1F9 Gm14523-201ENSMUST00000117260 558 ntBASIC24.25■■□□□ 1.47
Rpp40Q8R1F9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rpp40Q8R1F9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 Gm44428-201ENSMUST00000204474 874 ntBASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.24■■□□□ 1.47
Rpp40Q8R1F9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rpp40Q8R1F9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rpp40Q8R1F9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rpp40Q8R1F9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rpp40Q8R1F9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Rpp40Q8R1F9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rpp40Q8R1F9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Gm7332-201ENSMUST00000118351 454 ntBASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rpp40Q8R1F9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Rpp40Q8R1F9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpp40Q8R1F9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpp40Q8R1F9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpp40Q8R1F9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.17■■□□□ 1.46
Rpp40Q8R1F9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rpp40Q8R1F9 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.17■■□□□ 1.46
Rpp40Q8R1F9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpp40Q8R1F9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rpp40Q8R1F9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpp40Q8R1F9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Rpp40Q8R1F9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rpp40Q8R1F9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rpp40Q8R1F9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms