Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Smim29Q8R043 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.28□□□□□ -0.12
Smim29Q8R043 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim29Q8R043 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim29Q8R043 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim29Q8R043 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim29Q8R043 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim29Q8R043 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim29Q8R043 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim29Q8R043 Gm6821-201ENSMUST00000107540 542 ntBASIC14.26□□□□□ -0.13
Smim29Q8R043 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smim29Q8R043 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smim29Q8R043 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smim29Q8R043 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smim29Q8R043 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC14.26□□□□□ -0.13
Smim29Q8R043 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smim29Q8R043 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim29Q8R043 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.24□□□□□ -0.13
Smim29Q8R043 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim29Q8R043 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim29Q8R043 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Smim29Q8R043 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim29Q8R043 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim29Q8R043 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smim29Q8R043 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smim29Q8R043 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim29Q8R043 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim29Q8R043 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim29Q8R043 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smim29Q8R043 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smim29Q8R043 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smim29Q8R043 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Smim29Q8R043 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smim29Q8R043 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim29Q8R043 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.2□□□□□ -0.14
Smim29Q8R043 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.2□□□□□ -0.14
Smim29Q8R043 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim29Q8R043 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smim29Q8R043 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim29Q8R043 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim29Q8R043 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim29Q8R043 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim29Q8R043 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Smim29Q8R043 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.18□□□□□ -0.14
Smim29Q8R043 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim29Q8R043 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim29Q8R043 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim29Q8R043 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.17□□□□□ -0.14
Smim29Q8R043 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim29Q8R043 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smim29Q8R043 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim29Q8R043 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.15□□□□□ -0.14
Smim29Q8R043 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.15□□□□□ -0.14
Smim29Q8R043 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim29Q8R043 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smim29Q8R043 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim29Q8R043 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smim29Q8R043 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.14□□□□□ -0.15
Smim29Q8R043 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms