Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Calcoco1Q8CGU1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Calcoco1Q8CGU1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Calcoco1Q8CGU1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Calcoco1Q8CGU1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.22■■□□□ 1.31
Calcoco1Q8CGU1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Calcoco1Q8CGU1 Gm30023-201ENSMUST00000197970 889 ntBASIC23.21■■□□□ 1.31
Calcoco1Q8CGU1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Calcoco1Q8CGU1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Calcoco1Q8CGU1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Calcoco1Q8CGU1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Calcoco1Q8CGU1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Calcoco1Q8CGU1 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.2■■□□□ 1.3
Calcoco1Q8CGU1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Calcoco1Q8CGU1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Calcoco1Q8CGU1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Calcoco1Q8CGU1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Calcoco1Q8CGU1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Calcoco1Q8CGU1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Calcoco1Q8CGU1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Calcoco1Q8CGU1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Calcoco1Q8CGU1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Calcoco1Q8CGU1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Calcoco1Q8CGU1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.14■■□□□ 1.29
Calcoco1Q8CGU1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Calcoco1Q8CGU1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Calcoco1Q8CGU1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.14■■□□□ 1.29
Calcoco1Q8CGU1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Calcoco1Q8CGU1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Calcoco1Q8CGU1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Calcoco1Q8CGU1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.13■■□□□ 1.29
Calcoco1Q8CGU1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Calcoco1Q8CGU1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
Calcoco1Q8CGU1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Calcoco1Q8CGU1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.1■■□□□ 1.29
Calcoco1Q8CGU1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Calcoco1Q8CGU1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Calcoco1Q8CGU1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Calcoco1Q8CGU1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.08■■□□□ 1.29
Calcoco1Q8CGU1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.08■■□□□ 1.29
Calcoco1Q8CGU1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Calcoco1Q8CGU1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Calcoco1Q8CGU1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Calcoco1Q8CGU1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
Calcoco1Q8CGU1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Calcoco1Q8CGU1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Calcoco1Q8CGU1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Calcoco1Q8CGU1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Calcoco1Q8CGU1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms