Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco1Q8CEZ1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smco1Q8CEZ1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smco1Q8CEZ1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Smco1Q8CEZ1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Smco1Q8CEZ1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Smco1Q8CEZ1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smco1Q8CEZ1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.58■□□□□ 0.88
Smco1Q8CEZ1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smco1Q8CEZ1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smco1Q8CEZ1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smco1Q8CEZ1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smco1Q8CEZ1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smco1Q8CEZ1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smco1Q8CEZ1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smco1Q8CEZ1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smco1Q8CEZ1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smco1Q8CEZ1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.56■□□□□ 0.88
Smco1Q8CEZ1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Smco1Q8CEZ1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco1Q8CEZ1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smco1Q8CEZ1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.54■□□□□ 0.88
Smco1Q8CEZ1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smco1Q8CEZ1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smco1Q8CEZ1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smco1Q8CEZ1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smco1Q8CEZ1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smco1Q8CEZ1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smco1Q8CEZ1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smco1Q8CEZ1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smco1Q8CEZ1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.52■□□□□ 0.87
Smco1Q8CEZ1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.52■□□□□ 0.87
Smco1Q8CEZ1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smco1Q8CEZ1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smco1Q8CEZ1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 Gm16148-201ENSMUST00000119653 893 ntBASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco1Q8CEZ1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Smco1Q8CEZ1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.49■□□□□ 0.87
Smco1Q8CEZ1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smco1Q8CEZ1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smco1Q8CEZ1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smco1Q8CEZ1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smco1Q8CEZ1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smco1Q8CEZ1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smco1Q8CEZ1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smco1Q8CEZ1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Smco1Q8CEZ1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Smco1Q8CEZ1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco1Q8CEZ1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smco1Q8CEZ1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smco1Q8CEZ1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smco1Q8CEZ1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smco1Q8CEZ1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.43■□□□□ 0.86
Smco1Q8CEZ1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smco1Q8CEZ1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smco1Q8CEZ1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
Smco1Q8CEZ1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Smco1Q8CEZ1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smco1Q8CEZ1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smco1Q8CEZ1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.42■□□□□ 0.86
Smco1Q8CEZ1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smco1Q8CEZ1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smco1Q8CEZ1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smco1Q8CEZ1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smco1Q8CEZ1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms