Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.5■■□□□ 1.51
Lin9Q8C735 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Lin9Q8C735 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.49■■□□□ 1.51
Lin9Q8C735 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lin9Q8C735 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Lin9Q8C735 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lin9Q8C735 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Lin9Q8C735 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lin9Q8C735 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lin9Q8C735 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lin9Q8C735 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lin9Q8C735 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.47■■□□□ 1.51
Lin9Q8C735 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lin9Q8C735 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.46■■□□□ 1.51
Lin9Q8C735 Gm12366-201ENSMUST00000121722 873 ntBASIC24.46■■□□□ 1.51
Lin9Q8C735 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.46■■□□□ 1.51
Lin9Q8C735 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.46■■□□□ 1.51
Lin9Q8C735 Gm5786-201ENSMUST00000085368 882 ntBASIC24.46■■□□□ 1.51
Lin9Q8C735 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lin9Q8C735 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lin9Q8C735 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lin9Q8C735 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.45■■□□□ 1.5
Lin9Q8C735 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lin9Q8C735 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lin9Q8C735 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lin9Q8C735 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lin9Q8C735 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lin9Q8C735 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.44■■□□□ 1.5
Lin9Q8C735 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lin9Q8C735 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lin9Q8C735 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lin9Q8C735 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lin9Q8C735 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.43■■□□□ 1.5
Lin9Q8C735 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.43■■□□□ 1.5
Lin9Q8C735 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lin9Q8C735 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lin9Q8C735 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Lin9Q8C735 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.42■■□□□ 1.5
Lin9Q8C735 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.42■■□□□ 1.5
Lin9Q8C735 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lin9Q8C735 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lin9Q8C735 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lin9Q8C735 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lin9Q8C735 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lin9Q8C735 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Lin9Q8C735 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lin9Q8C735 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lin9Q8C735 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Lin9Q8C735 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lin9Q8C735 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lin9Q8C735 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lin9Q8C735 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Lin9Q8C735 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lin9Q8C735 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lin9Q8C735 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lin9Q8C735 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Lin9Q8C735 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lin9Q8C735 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lin9Q8C735 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lin9Q8C735 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Lin9Q8C735 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lin9Q8C735 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lin9Q8C735 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.35■■□□□ 1.49
Lin9Q8C735 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.35■■□□□ 1.49
Lin9Q8C735 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lin9Q8C735 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lin9Q8C735 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Lin9Q8C735 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lin9Q8C735 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lin9Q8C735 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lin9Q8C735 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Lin9Q8C735 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lin9Q8C735 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.33■■□□□ 1.49
Lin9Q8C735 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Lin9Q8C735 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Lin9Q8C735 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lin9Q8C735 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Lin9Q8C735 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lin9Q8C735 Gm27502-201ENSMUST00000183495 199 ntBASIC24.32■■□□□ 1.48
Lin9Q8C735 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Lin9Q8C735 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lin9Q8C735 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lin9Q8C735 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Lin9Q8C735 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Lin9Q8C735 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lin9Q8C735 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lin9Q8C735 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lin9Q8C735 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.31■■□□□ 1.48
Lin9Q8C735 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lin9Q8C735 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lin9Q8C735 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lin9Q8C735 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.3■■□□□ 1.48
Lin9Q8C735 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Lin9Q8C735 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lin9Q8C735 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lin9Q8C735 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.29■■□□□ 1.48
Lin9Q8C735 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Lin9Q8C735 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lin9Q8C735 Gm7332-201ENSMUST00000118351 454 ntBASIC24.29■■□□□ 1.48
Lin9Q8C735 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms