Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Brat1Q8C3R1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Brat1Q8C3R1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Brat1Q8C3R1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.82■■□□□ 1.4
Brat1Q8C3R1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Brat1Q8C3R1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Brat1Q8C3R1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Brat1Q8C3R1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Brat1Q8C3R1 Gm44428-201ENSMUST00000204474 874 ntBASIC23.8■■□□□ 1.4
Brat1Q8C3R1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.8■■□□□ 1.4
Brat1Q8C3R1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Brat1Q8C3R1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Brat1Q8C3R1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Gm12366-201ENSMUST00000121722 873 ntBASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Gm5786-201ENSMUST00000085368 882 ntBASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Cap2-205ENSMUST00000225824 1634 ntBASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Brat1Q8C3R1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Brat1Q8C3R1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Brat1Q8C3R1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Brat1Q8C3R1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Brat1Q8C3R1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.78■■□□□ 1.4
Brat1Q8C3R1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.77■■□□□ 1.4
Brat1Q8C3R1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Brat1Q8C3R1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Brat1Q8C3R1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Brat1Q8C3R1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Brat1Q8C3R1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Brat1Q8C3R1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Brat1Q8C3R1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Brat1Q8C3R1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Brat1Q8C3R1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Brat1Q8C3R1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Brat1Q8C3R1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Brat1Q8C3R1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Brat1Q8C3R1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Brat1Q8C3R1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Brat1Q8C3R1 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.73■■□□□ 1.39
Brat1Q8C3R1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Brat1Q8C3R1 Gm14523-201ENSMUST00000117260 558 ntBASIC23.73■■□□□ 1.39
Brat1Q8C3R1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Brat1Q8C3R1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Brat1Q8C3R1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Brat1Q8C3R1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Brat1Q8C3R1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Brat1Q8C3R1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Brat1Q8C3R1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Brat1Q8C3R1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.71■■□□□ 1.39
Brat1Q8C3R1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.71■■□□□ 1.39
Brat1Q8C3R1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Brat1Q8C3R1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Brat1Q8C3R1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Brat1Q8C3R1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Brat1Q8C3R1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Brat1Q8C3R1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Brat1Q8C3R1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Brat1Q8C3R1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Brat1Q8C3R1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Brat1Q8C3R1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Brat1Q8C3R1 Gm7332-201ENSMUST00000118351 454 ntBASIC23.69■■□□□ 1.38
Brat1Q8C3R1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Brat1Q8C3R1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.69■■□□□ 1.38
Brat1Q8C3R1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Brat1Q8C3R1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Brat1Q8C3R1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Brat1Q8C3R1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.67■■□□□ 1.38
Brat1Q8C3R1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Brat1Q8C3R1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.66■■□□□ 1.38
Brat1Q8C3R1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.66■■□□□ 1.38
Brat1Q8C3R1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Brat1Q8C3R1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Brat1Q8C3R1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.64■■□□□ 1.37
Brat1Q8C3R1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms