Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim4Q8C1Q6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Smim4Q8C1Q6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smim4Q8C1Q6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smim4Q8C1Q6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim4Q8C1Q6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim4Q8C1Q6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim4Q8C1Q6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim4Q8C1Q6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim4Q8C1Q6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim4Q8C1Q6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim4Q8C1Q6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.7■□□□□ 0.58
Smim4Q8C1Q6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim4Q8C1Q6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim4Q8C1Q6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.69■□□□□ 0.58
Smim4Q8C1Q6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smim4Q8C1Q6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim4Q8C1Q6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim4Q8C1Q6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smim4Q8C1Q6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smim4Q8C1Q6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.66■□□□□ 0.58
Smim4Q8C1Q6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smim4Q8C1Q6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smim4Q8C1Q6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim4Q8C1Q6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smim4Q8C1Q6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim4Q8C1Q6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim4Q8C1Q6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim4Q8C1Q6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smim4Q8C1Q6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim4Q8C1Q6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim4Q8C1Q6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim4Q8C1Q6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim4Q8C1Q6 Gm4799-201ENSMUST00000095396 657 ntBASIC18.61■□□□□ 0.57
Smim4Q8C1Q6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Smim4Q8C1Q6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim4Q8C1Q6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smim4Q8C1Q6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms