Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.23■□□□□ 0.99
Ppp1r3eQ8BRJ4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp1r3eQ8BRJ4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ppp1r3eQ8BRJ4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ppp1r3eQ8BRJ4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Ppp1r3eQ8BRJ4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ppp1r3eQ8BRJ4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ppp1r3eQ8BRJ4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ppp1r3eQ8BRJ4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.21■□□□□ 0.99
Ppp1r3eQ8BRJ4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ppp1r3eQ8BRJ4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ppp1r3eQ8BRJ4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ppp1r3eQ8BRJ4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ppp1r3eQ8BRJ4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ppp1r3eQ8BRJ4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ppp1r3eQ8BRJ4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ppp1r3eQ8BRJ4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp1r3eQ8BRJ4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ppp1r3eQ8BRJ4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ppp1r3eQ8BRJ4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Ppp1r3eQ8BRJ4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ppp1r3eQ8BRJ4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ppp1r3eQ8BRJ4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ppp1r3eQ8BRJ4 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.14■□□□□ 0.98
Ppp1r3eQ8BRJ4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
Ppp1r3eQ8BRJ4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ppp1r3eQ8BRJ4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ppp1r3eQ8BRJ4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ppp1r3eQ8BRJ4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ppp1r3eQ8BRJ4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ppp1r3eQ8BRJ4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp1r3eQ8BRJ4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ppp1r3eQ8BRJ4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ppp1r3eQ8BRJ4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.13■□□□□ 0.97
Ppp1r3eQ8BRJ4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.13■□□□□ 0.97
Ppp1r3eQ8BRJ4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.12■□□□□ 0.97
Ppp1r3eQ8BRJ4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.12■□□□□ 0.97
Ppp1r3eQ8BRJ4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.12■□□□□ 0.97
Ppp1r3eQ8BRJ4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ppp1r3eQ8BRJ4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ppp1r3eQ8BRJ4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ppp1r3eQ8BRJ4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.1■□□□□ 0.97
Ppp1r3eQ8BRJ4 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.1■□□□□ 0.97
Ppp1r3eQ8BRJ4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.1■□□□□ 0.97
Ppp1r3eQ8BRJ4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp1r3eQ8BRJ4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ppp1r3eQ8BRJ4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.09■□□□□ 0.97
Ppp1r3eQ8BRJ4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp1r3eQ8BRJ4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ppp1r3eQ8BRJ4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.09■□□□□ 0.97
Ppp1r3eQ8BRJ4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ppp1r3eQ8BRJ4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ppp1r3eQ8BRJ4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Ppp1r3eQ8BRJ4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ppp1r3eQ8BRJ4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ppp1r3eQ8BRJ4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ppp1r3eQ8BRJ4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ppp1r3eQ8BRJ4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ppp1r3eQ8BRJ4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ppp1r3eQ8BRJ4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp1r3eQ8BRJ4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp1r3eQ8BRJ4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ppp1r3eQ8BRJ4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.06■□□□□ 0.96
Ppp1r3eQ8BRJ4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp1r3eQ8BRJ4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ppp1r3eQ8BRJ4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ppp1r3eQ8BRJ4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp1r3eQ8BRJ4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp1r3eQ8BRJ4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ppp1r3eQ8BRJ4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.05■□□□□ 0.96
Ppp1r3eQ8BRJ4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.05■□□□□ 0.96
Ppp1r3eQ8BRJ4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ppp1r3eQ8BRJ4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ppp1r3eQ8BRJ4 Gm6821-201ENSMUST00000107540 542 ntBASIC21.04■□□□□ 0.96
Ppp1r3eQ8BRJ4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ppp1r3eQ8BRJ4 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.04■□□□□ 0.96
Ppp1r3eQ8BRJ4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ppp1r3eQ8BRJ4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ppp1r3eQ8BRJ4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ppp1r3eQ8BRJ4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ppp1r3eQ8BRJ4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.02■□□□□ 0.96
Ppp1r3eQ8BRJ4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.02■□□□□ 0.96
Ppp1r3eQ8BRJ4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.02■□□□□ 0.96
Ppp1r3eQ8BRJ4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ppp1r3eQ8BRJ4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ppp1r3eQ8BRJ4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ppp1r3eQ8BRJ4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms