Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nhlrc1Q8BR37 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nhlrc1Q8BR37 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlrc1Q8BR37 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.38■□□□□ 0.37
Nhlrc1Q8BR37 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.38■□□□□ 0.37
Nhlrc1Q8BR37 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhlrc1Q8BR37 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhlrc1Q8BR37 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.36■□□□□ 0.37
Nhlrc1Q8BR37 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlrc1Q8BR37 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlrc1Q8BR37 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlrc1Q8BR37 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhlrc1Q8BR37 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlrc1Q8BR37 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlrc1Q8BR37 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlrc1Q8BR37 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlrc1Q8BR37 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhlrc1Q8BR37 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nhlrc1Q8BR37 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.34■□□□□ 0.37
Nhlrc1Q8BR37 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.34■□□□□ 0.37
Nhlrc1Q8BR37 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.34■□□□□ 0.37
Nhlrc1Q8BR37 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nhlrc1Q8BR37 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhlrc1Q8BR37 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nhlrc1Q8BR37 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nhlrc1Q8BR37 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nhlrc1Q8BR37 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nhlrc1Q8BR37 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Gm5921-201ENSMUST00000075898 882 ntBASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.32■□□□□ 0.36
Nhlrc1Q8BR37 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhlrc1Q8BR37 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nhlrc1Q8BR37 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhlrc1Q8BR37 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nhlrc1Q8BR37 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhlrc1Q8BR37 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.3■□□□□ 0.36
Nhlrc1Q8BR37 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nhlrc1Q8BR37 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhlrc1Q8BR37 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhlrc1Q8BR37 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nhlrc1Q8BR37 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nhlrc1Q8BR37 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.27■□□□□ 0.35
Nhlrc1Q8BR37 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlrc1Q8BR37 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Nhlrc1Q8BR37 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlrc1Q8BR37 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlrc1Q8BR37 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlrc1Q8BR37 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nhlrc1Q8BR37 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nhlrc1Q8BR37 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nhlrc1Q8BR37 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.25■□□□□ 0.35
Nhlrc1Q8BR37 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nhlrc1Q8BR37 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhlrc1Q8BR37 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhlrc1Q8BR37 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nhlrc1Q8BR37 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.23■□□□□ 0.35
Nhlrc1Q8BR37 Gm5812-201ENSMUST00000061073 957 ntBASIC17.23■□□□□ 0.35
Nhlrc1Q8BR37 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nhlrc1Q8BR37 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhlrc1Q8BR37 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Nhlrc1Q8BR37 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.22■□□□□ 0.35
Nhlrc1Q8BR37 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhlrc1Q8BR37 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nhlrc1Q8BR37 Amer2-203ENSMUST00000225247 2662 ntBASIC17.22■□□□□ 0.35
Nhlrc1Q8BR37 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhlrc1Q8BR37 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Nhlrc1Q8BR37 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nhlrc1Q8BR37 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms