Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smco3Q8BQM7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smco3Q8BQM7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.48■□□□□ 0.55
Smco3Q8BQM7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smco3Q8BQM7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco3Q8BQM7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco3Q8BQM7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smco3Q8BQM7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.47■□□□□ 0.55
Smco3Q8BQM7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smco3Q8BQM7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smco3Q8BQM7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smco3Q8BQM7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smco3Q8BQM7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.45■□□□□ 0.54
Smco3Q8BQM7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smco3Q8BQM7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smco3Q8BQM7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco3Q8BQM7 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.43■□□□□ 0.54
Smco3Q8BQM7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smco3Q8BQM7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smco3Q8BQM7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smco3Q8BQM7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Particl-201ENSMUST00000205370 1560 ntBASIC18.42■□□□□ 0.54
Smco3Q8BQM7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smco3Q8BQM7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smco3Q8BQM7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smco3Q8BQM7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smco3Q8BQM7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smco3Q8BQM7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Smco3Q8BQM7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smco3Q8BQM7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Smco3Q8BQM7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smco3Q8BQM7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smco3Q8BQM7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smco3Q8BQM7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smco3Q8BQM7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smco3Q8BQM7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smco3Q8BQM7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Smco3Q8BQM7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smco3Q8BQM7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smco3Q8BQM7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smco3Q8BQM7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smco3Q8BQM7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco3Q8BQM7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco3Q8BQM7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smco3Q8BQM7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smco3Q8BQM7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smco3Q8BQM7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms