Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.31■■□□□ 1
SynbQ8BI41 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SynbQ8BI41 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SynbQ8BI41 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SynbQ8BI41 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SynbQ8BI41 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SynbQ8BI41 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SynbQ8BI41 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SynbQ8BI41 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.29■■□□□ 1
SynbQ8BI41 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SynbQ8BI41 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SynbQ8BI41 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SynbQ8BI41 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.28■■□□□ 1
SynbQ8BI41 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SynbQ8BI41 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.27■■□□□ 1
SynbQ8BI41 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.27■■□□□ 1
SynbQ8BI41 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SynbQ8BI41 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SynbQ8BI41 Gm5812-201ENSMUST00000061073 957 ntBASIC21.27■■□□□ 1
SynbQ8BI41 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SynbQ8BI41 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SynbQ8BI41 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SynbQ8BI41 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SynbQ8BI41 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SynbQ8BI41 Gm5921-201ENSMUST00000075898 882 ntBASIC21.26■□□□□ 0.99
SynbQ8BI41 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SynbQ8BI41 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SynbQ8BI41 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SynbQ8BI41 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SynbQ8BI41 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
SynbQ8BI41 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.25■□□□□ 0.99
SynbQ8BI41 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
SynbQ8BI41 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynbQ8BI41 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynbQ8BI41 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynbQ8BI41 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynbQ8BI41 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SynbQ8BI41 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynbQ8BI41 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SynbQ8BI41 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SynbQ8BI41 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SynbQ8BI41 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SynbQ8BI41 Terc-201ENSMUST00000082862 423 ntBASIC21.23■□□□□ 0.99
SynbQ8BI41 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SynbQ8BI41 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SynbQ8BI41 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SynbQ8BI41 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SynbQ8BI41 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynbQ8BI41 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.21■□□□□ 0.99
SynbQ8BI41 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynbQ8BI41 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynbQ8BI41 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.21■□□□□ 0.99
SynbQ8BI41 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.21■□□□□ 0.99
SynbQ8BI41 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynbQ8BI41 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynbQ8BI41 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.2■□□□□ 0.98
SynbQ8BI41 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SynbQ8BI41 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.19■□□□□ 0.98
SynbQ8BI41 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynbQ8BI41 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynbQ8BI41 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynbQ8BI41 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.18■□□□□ 0.98
SynbQ8BI41 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynbQ8BI41 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynbQ8BI41 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SynbQ8BI41 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
SynbQ8BI41 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SynbQ8BI41 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SynbQ8BI41 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SynbQ8BI41 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
SynbQ8BI41 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SynbQ8BI41 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SynbQ8BI41 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.16■□□□□ 0.98
SynbQ8BI41 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SynbQ8BI41 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SynbQ8BI41 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SynbQ8BI41 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SynbQ8BI41 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.15■□□□□ 0.98
SynbQ8BI41 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SynbQ8BI41 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SynbQ8BI41 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SynbQ8BI41 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SynbQ8BI41 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SynbQ8BI41 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SynbQ8BI41 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SynbQ8BI41 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SynbQ8BI41 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SynbQ8BI41 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynbQ8BI41 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynbQ8BI41 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynbQ8BI41 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SynbQ8BI41 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynbQ8BI41 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SynbQ8BI41 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms