Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atpaf1Q811I0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Atpaf1Q811I0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atpaf1Q811I0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atpaf1Q811I0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atpaf1Q811I0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.43■□□□□ 0.54
Atpaf1Q811I0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Gm26115-201ENSMUST00000175605 87 ntBASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atpaf1Q811I0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atpaf1Q811I0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atpaf1Q811I0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Atpaf1Q811I0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atpaf1Q811I0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Atpaf1Q811I0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atpaf1Q811I0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atpaf1Q811I0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atpaf1Q811I0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Atpaf1Q811I0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 Gm8109-201ENSMUST00000194076 746 ntBASIC18.39■□□□□ 0.53
Atpaf1Q811I0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atpaf1Q811I0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Atpaf1Q811I0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Atpaf1Q811I0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.37■□□□□ 0.53
Atpaf1Q811I0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atpaf1Q811I0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Atpaf1Q811I0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atpaf1Q811I0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Atpaf1Q811I0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atpaf1Q811I0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atpaf1Q811I0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Atpaf1Q811I0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atpaf1Q811I0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atpaf1Q811I0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atpaf1Q811I0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Atpaf1Q811I0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Atpaf1Q811I0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atpaf1Q811I0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atpaf1Q811I0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atpaf1Q811I0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atpaf1Q811I0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atpaf1Q811I0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atpaf1Q811I0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atpaf1Q811I0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atpaf1Q811I0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.33■□□□□ 0.52
Atpaf1Q811I0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.33■□□□□ 0.52
Atpaf1Q811I0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atpaf1Q811I0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atpaf1Q811I0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atpaf1Q811I0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atpaf1Q811I0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atpaf1Q811I0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atpaf1Q811I0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atpaf1Q811I0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Atpaf1Q811I0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atpaf1Q811I0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atpaf1Q811I0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atpaf1Q811I0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atpaf1Q811I0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atpaf1Q811I0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atpaf1Q811I0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atpaf1Q811I0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atpaf1Q811I0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atpaf1Q811I0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atpaf1Q811I0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atpaf1Q811I0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atpaf1Q811I0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atpaf1Q811I0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atpaf1Q811I0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atpaf1Q811I0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atpaf1Q811I0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atpaf1Q811I0 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.26■□□□□ 0.51
Atpaf1Q811I0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms