Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim62Q80V85 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Trim62Q80V85 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim62Q80V85 Gm44428-201ENSMUST00000204474 874 ntBASIC23.37■■□□□ 1.33
Trim62Q80V85 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim62Q80V85 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim62Q80V85 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim62Q80V85 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim62Q80V85 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim62Q80V85 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.35■■□□□ 1.33
Trim62Q80V85 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim62Q80V85 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim62Q80V85 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
Trim62Q80V85 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.35■■□□□ 1.33
Trim62Q80V85 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim62Q80V85 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim62Q80V85 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Trim62Q80V85 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim62Q80V85 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim62Q80V85 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.32■■□□□ 1.32
Trim62Q80V85 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Trim62Q80V85 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim62Q80V85 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim62Q80V85 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim62Q80V85 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim62Q80V85 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim62Q80V85 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.3■■□□□ 1.32
Trim62Q80V85 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.3■■□□□ 1.32
Trim62Q80V85 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.3■■□□□ 1.32
Trim62Q80V85 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Trim62Q80V85 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim62Q80V85 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Trim62Q80V85 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim62Q80V85 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim62Q80V85 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.26■■□□□ 1.31
Trim62Q80V85 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim62Q80V85 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.26■■□□□ 1.31
Trim62Q80V85 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trim62Q80V85 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim62Q80V85 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim62Q80V85 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim62Q80V85 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Trim62Q80V85 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.25■■□□□ 1.31
Trim62Q80V85 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim62Q80V85 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Trim62Q80V85 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trim62Q80V85 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.24■■□□□ 1.31
Trim62Q80V85 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim62Q80V85 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim62Q80V85 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim62Q80V85 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.23■■□□□ 1.31
Trim62Q80V85 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.23■■□□□ 1.31
Trim62Q80V85 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim62Q80V85 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim62Q80V85 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim62Q80V85 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim62Q80V85 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.22■■□□□ 1.31
Trim62Q80V85 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.22■■□□□ 1.31
Trim62Q80V85 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim62Q80V85 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim62Q80V85 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim62Q80V85 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim62Q80V85 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim62Q80V85 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.21■■□□□ 1.31
Trim62Q80V85 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim62Q80V85 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim62Q80V85 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trim62Q80V85 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim62Q80V85 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.2■■□□□ 1.3
Trim62Q80V85 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim62Q80V85 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim62Q80V85 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Trim62Q80V85 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Trim62Q80V85 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim62Q80V85 Gm14523-201ENSMUST00000117260 558 ntBASIC23.19■■□□□ 1.3
Trim62Q80V85 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim62Q80V85 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim62Q80V85 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim62Q80V85 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim62Q80V85 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim62Q80V85 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim62Q80V85 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Gm12366-201ENSMUST00000121722 873 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.18■■□□□ 1.3
Trim62Q80V85 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Gm5786-201ENSMUST00000085368 882 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim62Q80V85 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim62Q80V85 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.18■■□□□ 1.3
Trim62Q80V85 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim62Q80V85 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim62Q80V85 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms