Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp38Q80UU2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Rpp38Q80UU2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.65■■□□□ 1.22
Rpp38Q80UU2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rpp38Q80UU2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.65■■□□□ 1.22
Rpp38Q80UU2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rpp38Q80UU2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.64■■□□□ 1.21
Rpp38Q80UU2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.64■■□□□ 1.21
Rpp38Q80UU2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.64■■□□□ 1.21
Rpp38Q80UU2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp38Q80UU2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Rpp38Q80UU2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp38Q80UU2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.63■■□□□ 1.21
Rpp38Q80UU2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp38Q80UU2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp38Q80UU2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp38Q80UU2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rpp38Q80UU2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Rpp38Q80UU2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rpp38Q80UU2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rpp38Q80UU2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rpp38Q80UU2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rpp38Q80UU2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.62■■□□□ 1.21
Rpp38Q80UU2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp38Q80UU2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp38Q80UU2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp38Q80UU2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rpp38Q80UU2 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.6■■□□□ 1.21
Rpp38Q80UU2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rpp38Q80UU2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rpp38Q80UU2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rpp38Q80UU2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rpp38Q80UU2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rpp38Q80UU2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rpp38Q80UU2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.58■■□□□ 1.21
Rpp38Q80UU2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpp38Q80UU2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpp38Q80UU2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpp38Q80UU2 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.56■■□□□ 1.2
Rpp38Q80UU2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp38Q80UU2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp38Q80UU2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp38Q80UU2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp38Q80UU2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpp38Q80UU2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.55■■□□□ 1.2
Rpp38Q80UU2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Rpp38Q80UU2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp38Q80UU2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp38Q80UU2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rpp38Q80UU2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpp38Q80UU2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp38Q80UU2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp38Q80UU2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp38Q80UU2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rpp38Q80UU2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp38Q80UU2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp38Q80UU2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.53■■□□□ 1.2
Rpp38Q80UU2 Scarna2-201ENSMUST00000157560 414 ntBASIC22.53■■□□□ 1.2
Rpp38Q80UU2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rpp38Q80UU2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp38Q80UU2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp38Q80UU2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp38Q80UU2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp38Q80UU2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp38Q80UU2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.52■■□□□ 1.2
Rpp38Q80UU2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp38Q80UU2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp38Q80UU2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpp38Q80UU2 Gm9806-201ENSMUST00000051080 552 ntBASIC22.51■■□□□ 1.19
Rpp38Q80UU2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.5■■□□□ 1.19
Rpp38Q80UU2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.49■■□□□ 1.19
Rpp38Q80UU2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpp38Q80UU2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpp38Q80UU2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rpp38Q80UU2 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.48■■□□□ 1.19
Rpp38Q80UU2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Rpp38Q80UU2 Gm16437-201ENSMUST00000025669 507 ntBASIC22.48■■□□□ 1.19
Rpp38Q80UU2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp38Q80UU2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp38Q80UU2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpp38Q80UU2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rpp38Q80UU2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp38Q80UU2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp38Q80UU2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp38Q80UU2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp38Q80UU2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.46■■□□□ 1.19
Rpp38Q80UU2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp38Q80UU2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Rpp38Q80UU2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp38Q80UU2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp38Q80UU2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rpp38Q80UU2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Rpp38Q80UU2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms