Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rnf220Q6PDX6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
Rnf220Q6PDX6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf220Q6PDX6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Zfp131-205ENSMUST00000223812 663 ntBASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Rnf220Q6PDX6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf220Q6PDX6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf220Q6PDX6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.18■□□□□ 0.98
Rnf220Q6PDX6 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.18■□□□□ 0.98
Rnf220Q6PDX6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf220Q6PDX6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf220Q6PDX6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rnf220Q6PDX6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf220Q6PDX6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf220Q6PDX6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rnf220Q6PDX6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rnf220Q6PDX6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.15■□□□□ 0.98
Rnf220Q6PDX6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf220Q6PDX6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.14■□□□□ 0.97
Rnf220Q6PDX6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
Rnf220Q6PDX6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.13■□□□□ 0.97
Rnf220Q6PDX6 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.13■□□□□ 0.97
Rnf220Q6PDX6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rnf220Q6PDX6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf220Q6PDX6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.12■□□□□ 0.97
Rnf220Q6PDX6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf220Q6PDX6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf220Q6PDX6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rnf220Q6PDX6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf220Q6PDX6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf220Q6PDX6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf220Q6PDX6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf220Q6PDX6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rnf220Q6PDX6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf220Q6PDX6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf220Q6PDX6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rnf220Q6PDX6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rnf220Q6PDX6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf220Q6PDX6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf220Q6PDX6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf220Q6PDX6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf220Q6PDX6 Gm9397-201ENSMUST00000200125 605 ntBASIC21.07■□□□□ 0.96
Rnf220Q6PDX6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Rnf220Q6PDX6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf220Q6PDX6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf220Q6PDX6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf220Q6PDX6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rnf220Q6PDX6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rnf220Q6PDX6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf220Q6PDX6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.05■□□□□ 0.96
Rnf220Q6PDX6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rnf220Q6PDX6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Gm24970-201ENSMUST00000175582 82 ntBASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rnf220Q6PDX6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf220Q6PDX6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms