Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhga7Q6DD96 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga7Q6DD96 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhga7Q6DD96 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhga7Q6DD96 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhga7Q6DD96 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga7Q6DD96 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga7Q6DD96 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga7Q6DD96 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga7Q6DD96 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga7Q6DD96 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhga7Q6DD96 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga7Q6DD96 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga7Q6DD96 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.73■■□□□ 1.07
Pcdhga7Q6DD96 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhga7Q6DD96 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga7Q6DD96 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga7Q6DD96 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga7Q6DD96 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Pcdhga7Q6DD96 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga7Q6DD96 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga7Q6DD96 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhga7Q6DD96 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga7Q6DD96 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdhga7Q6DD96 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga7Q6DD96 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhga7Q6DD96 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga7Q6DD96 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhga7Q6DD96 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga7Q6DD96 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga7Q6DD96 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga7Q6DD96 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga7Q6DD96 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga7Q6DD96 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga7Q6DD96 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga7Q6DD96 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Pcdhga7Q6DD96 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga7Q6DD96 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhga7Q6DD96 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga7Q6DD96 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga7Q6DD96 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga7Q6DD96 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga7Q6DD96 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga7Q6DD96 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga7Q6DD96 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga7Q6DD96 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga7Q6DD96 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga7Q6DD96 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga7Q6DD96 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga7Q6DD96 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhga7Q6DD96 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga7Q6DD96 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga7Q6DD96 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Pcdhga7Q6DD96 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.6■■□□□ 1.05
Pcdhga7Q6DD96 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms