Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufa4Q62425 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ndufa4Q62425 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndufa4Q62425 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndufa4Q62425 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufa4Q62425 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufa4Q62425 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufa4Q62425 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufa4Q62425 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufa4Q62425 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufa4Q62425 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.33■□□□□ 0.2
Ndufa4Q62425 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndufa4Q62425 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndufa4Q62425 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndufa4Q62425 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndufa4Q62425 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.29■□□□□ 0.2
Ndufa4Q62425 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndufa4Q62425 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ndufa4Q62425 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndufa4Q62425 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndufa4Q62425 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndufa4Q62425 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndufa4Q62425 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ndufa4Q62425 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndufa4Q62425 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.27■□□□□ 0.2
Ndufa4Q62425 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Ndufa4Q62425 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndufa4Q62425 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ndufa4Q62425 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndufa4Q62425 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.26■□□□□ 0.19
Ndufa4Q62425 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndufa4Q62425 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ndufa4Q62425 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndufa4Q62425 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ndufa4Q62425 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.26■□□□□ 0.19
Ndufa4Q62425 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndufa4Q62425 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa4Q62425 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa4Q62425 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa4Q62425 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa4Q62425 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndufa4Q62425 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufa4Q62425 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufa4Q62425 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufa4Q62425 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndufa4Q62425 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ndufa4Q62425 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndufa4Q62425 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa4Q62425 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa4Q62425 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa4Q62425 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndufa4Q62425 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndufa4Q62425 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ndufa4Q62425 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndufa4Q62425 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndufa4Q62425 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa4Q62425 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa4Q62425 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndufa4Q62425 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.2■□□□□ 0.18
Ndufa4Q62425 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms