Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox17Q61473 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox17Q61473 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox17Q61473 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox17Q61473 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Sox17Q61473 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Sox17Q61473 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox17Q61473 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sox17Q61473 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.12■□□□□ 0.97
Sox17Q61473 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.12■□□□□ 0.97
Sox17Q61473 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sox17Q61473 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox17Q61473 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox17Q61473 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox17Q61473 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.11■□□□□ 0.97
Sox17Q61473 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox17Q61473 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sox17Q61473 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Sox17Q61473 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Sox17Q61473 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox17Q61473 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox17Q61473 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox17Q61473 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox17Q61473 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox17Q61473 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox17Q61473 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Sox17Q61473 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox17Q61473 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.08■□□□□ 0.96
Sox17Q61473 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.07■□□□□ 0.96
Sox17Q61473 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox17Q61473 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Sox17Q61473 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox17Q61473 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.06■□□□□ 0.96
Sox17Q61473 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox17Q61473 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sox17Q61473 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Sox17Q61473 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.06■□□□□ 0.96
Sox17Q61473 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox17Q61473 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox17Q61473 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox17Q61473 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sox17Q61473 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.04■□□□□ 0.96
Sox17Q61473 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox17Q61473 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.04■□□□□ 0.96
Sox17Q61473 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sox17Q61473 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox17Q61473 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sox17Q61473 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.04■□□□□ 0.96
Sox17Q61473 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox17Q61473 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox17Q61473 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox17Q61473 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sox17Q61473 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox17Q61473 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox17Q61473 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.03■□□□□ 0.96
Sox17Q61473 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox17Q61473 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox17Q61473 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox17Q61473 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox17Q61473 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox17Q61473 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox17Q61473 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox17Q61473 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Sox17Q61473 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox17Q61473 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sox17Q61473 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox17Q61473 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox17Q61473 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox17Q61473 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sox17Q61473 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Sox17Q61473 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox17Q61473 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sox17Q61473 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox17Q61473 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Sox17Q61473 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sox17Q61473 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox17Q61473 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox17Q61473 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Sox17Q61473 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sox17Q61473 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sox17Q61473 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.98■□□□□ 0.95
Sox17Q61473 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.98■□□□□ 0.95
Sox17Q61473 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox17Q61473 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox17Q61473 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox17Q61473 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.96■□□□□ 0.95
Sox17Q61473 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sox17Q61473 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox17Q61473 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sox17Q61473 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sox17Q61473 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sox17Q61473 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms