Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfhr1Q61406 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.13■□□□□ 0.81
Cfhr1Q61406 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfhr1Q61406 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfhr1Q61406 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfhr1Q61406 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cfhr1Q61406 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cfhr1Q61406 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.11■□□□□ 0.81
Cfhr1Q61406 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfhr1Q61406 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfhr1Q61406 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cfhr1Q61406 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfhr1Q61406 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfhr1Q61406 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cfhr1Q61406 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Cfhr1Q61406 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.09■□□□□ 0.81
Cfhr1Q61406 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfhr1Q61406 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfhr1Q61406 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfhr1Q61406 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Cfhr1Q61406 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfhr1Q61406 Gm43566-201ENSMUST00000196851 808 ntBASIC20.08■□□□□ 0.81
Cfhr1Q61406 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cfhr1Q61406 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.08■□□□□ 0.81
Cfhr1Q61406 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfhr1Q61406 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cfhr1Q61406 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cfhr1Q61406 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfhr1Q61406 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.07■□□□□ 0.8
Cfhr1Q61406 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfhr1Q61406 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfhr1Q61406 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfhr1Q61406 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfhr1Q61406 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfhr1Q61406 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfhr1Q61406 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cfhr1Q61406 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cfhr1Q61406 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfhr1Q61406 Gm13238-201ENSMUST00000117655 780 ntBASIC20.05■□□□□ 0.8
Cfhr1Q61406 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfhr1Q61406 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cfhr1Q61406 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cfhr1Q61406 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.04■□□□□ 0.8
Cfhr1Q61406 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Cfhr1Q61406 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.04■□□□□ 0.8
Cfhr1Q61406 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.04■□□□□ 0.8
Cfhr1Q61406 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cfhr1Q61406 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfhr1Q61406 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfhr1Q61406 Rps24-207ENSMUST00000224568 714 ntBASIC20.03■□□□□ 0.8
Cfhr1Q61406 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cfhr1Q61406 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfhr1Q61406 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cfhr1Q61406 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cfhr1Q61406 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cfhr1Q61406 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cfhr1Q61406 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cfhr1Q61406 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.01■□□□□ 0.79
Cfhr1Q61406 Gm15820-201ENSMUST00000201566 728 ntBASIC20.01■□□□□ 0.79
Cfhr1Q61406 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cfhr1Q61406 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfhr1Q61406 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cfhr1Q61406 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cfhr1Q61406 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cfhr1Q61406 Gm45444-201ENSMUST00000211394 898 ntBASIC20■□□□□ 0.79
Cfhr1Q61406 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cfhr1Q61406 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20■□□□□ 0.79
Cfhr1Q61406 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cfhr1Q61406 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfhr1Q61406 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfhr1Q61406 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.99■□□□□ 0.79
Cfhr1Q61406 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Cfhr1Q61406 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cfhr1Q61406 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.99■□□□□ 0.79
Cfhr1Q61406 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Cfhr1Q61406 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.98■□□□□ 0.79
Cfhr1Q61406 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfhr1Q61406 Gm45102-201ENSMUST00000207427 857 ntBASIC19.98■□□□□ 0.79
Cfhr1Q61406 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Cfhr1Q61406 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cfhr1Q61406 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfhr1Q61406 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfhr1Q61406 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.95■□□□□ 0.78
Cfhr1Q61406 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfhr1Q61406 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cfhr1Q61406 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cfhr1Q61406 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.94■□□□□ 0.78
Cfhr1Q61406 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.94■□□□□ 0.78
Cfhr1Q61406 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cfhr1Q61406 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.93■□□□□ 0.78
Cfhr1Q61406 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.93■□□□□ 0.78
Cfhr1Q61406 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms