Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfaip3Q60769 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfaip3Q60769 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfaip3Q60769 Gm27502-201ENSMUST00000183495 199 ntBASIC21.17■□□□□ 0.98
Tnfaip3Q60769 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.17■□□□□ 0.98
Tnfaip3Q60769 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfaip3Q60769 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfaip3Q60769 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfaip3Q60769 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.15■□□□□ 0.98
Tnfaip3Q60769 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfaip3Q60769 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfaip3Q60769 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.14■□□□□ 0.97
Tnfaip3Q60769 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfaip3Q60769 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfaip3Q60769 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfaip3Q60769 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfaip3Q60769 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfaip3Q60769 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfaip3Q60769 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfaip3Q60769 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfaip3Q60769 Gm14523-201ENSMUST00000117260 558 ntBASIC21.12■□□□□ 0.97
Tnfaip3Q60769 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.12■□□□□ 0.97
Tnfaip3Q60769 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Tnfaip3Q60769 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfaip3Q60769 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Gm44428-201ENSMUST00000204474 874 ntBASIC21.11■□□□□ 0.97
Tnfaip3Q60769 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Tnfaip3Q60769 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfaip3Q60769 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.1■□□□□ 0.97
Tnfaip3Q60769 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.1■□□□□ 0.97
Tnfaip3Q60769 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfaip3Q60769 Gm7332-201ENSMUST00000118351 454 ntBASIC21.09■□□□□ 0.97
Tnfaip3Q60769 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfaip3Q60769 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
Tnfaip3Q60769 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tnfaip3Q60769 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tnfaip3Q60769 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfaip3Q60769 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfaip3Q60769 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Tnfaip3Q60769 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfaip3Q60769 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.07■□□□□ 0.96
Tnfaip3Q60769 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tnfaip3Q60769 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfaip3Q60769 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfaip3Q60769 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfaip3Q60769 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfaip3Q60769 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfaip3Q60769 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfaip3Q60769 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfaip3Q60769 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Tnfaip3Q60769 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Tnfaip3Q60769 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfaip3Q60769 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.04■□□□□ 0.96
Tnfaip3Q60769 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfaip3Q60769 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfaip3Q60769 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tnfaip3Q60769 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfaip3Q60769 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Tnfaip3Q60769 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfaip3Q60769 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfaip3Q60769 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.02■□□□□ 0.96
Tnfaip3Q60769 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfaip3Q60769 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfaip3Q60769 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tnfaip3Q60769 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfaip3Q60769 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Tnfaip3Q60769 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21■□□□□ 0.95
Tnfaip3Q60769 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21■□□□□ 0.95
Tnfaip3Q60769 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21■□□□□ 0.95
Tnfaip3Q60769 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21■□□□□ 0.95
Tnfaip3Q60769 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tnfaip3Q60769 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21■□□□□ 0.95
Tnfaip3Q60769 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfaip3Q60769 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Tnfaip3Q60769 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfaip3Q60769 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfaip3Q60769 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfaip3Q60769 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.98■□□□□ 0.95
Tnfaip3Q60769 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfaip3Q60769 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tnfaip3Q60769 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tnfaip3Q60769 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.97■□□□□ 0.95
Tnfaip3Q60769 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfaip3Q60769 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfaip3Q60769 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfaip3Q60769 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfaip3Q60769 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfaip3Q60769 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 212.4 ms