Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trp53rkaQ5U452 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trp53rkaQ5U452 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trp53rkaQ5U452 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trp53rkaQ5U452 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trp53rkaQ5U452 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trp53rkaQ5U452 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trp53rkaQ5U452 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trp53rkaQ5U452 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.61■□□□□ 0.41
Trp53rkaQ5U452 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trp53rkaQ5U452 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.61■□□□□ 0.41
Trp53rkaQ5U452 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trp53rkaQ5U452 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trp53rkaQ5U452 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trp53rkaQ5U452 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trp53rkaQ5U452 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trp53rkaQ5U452 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trp53rkaQ5U452 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trp53rkaQ5U452 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trp53rkaQ5U452 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trp53rkaQ5U452 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.58■□□□□ 0.4
Trp53rkaQ5U452 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trp53rkaQ5U452 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trp53rkaQ5U452 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Trp53rkaQ5U452 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trp53rkaQ5U452 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trp53rkaQ5U452 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trp53rkaQ5U452 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trp53rkaQ5U452 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trp53rkaQ5U452 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trp53rkaQ5U452 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trp53rkaQ5U452 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trp53rkaQ5U452 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trp53rkaQ5U452 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trp53rkaQ5U452 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trp53rkaQ5U452 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trp53rkaQ5U452 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trp53rkaQ5U452 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trp53rkaQ5U452 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trp53rkaQ5U452 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.53■□□□□ 0.4
Trp53rkaQ5U452 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trp53rkaQ5U452 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trp53rkaQ5U452 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trp53rkaQ5U452 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trp53rkaQ5U452 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trp53rkaQ5U452 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.52■□□□□ 0.39
Trp53rkaQ5U452 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trp53rkaQ5U452 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Trp53rkaQ5U452 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trp53rkaQ5U452 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms