Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-3Q5R1E6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-3Q5R1E6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav6-3Q5R1E6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.03■□□□□ 0.48
Trav6-3Q5R1E6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6-3Q5R1E6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6-3Q5R1E6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-3Q5R1E6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav6-3Q5R1E6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav6-3Q5R1E6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6-3Q5R1E6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-3Q5R1E6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Trav6-3Q5R1E6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav6-3Q5R1E6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-3Q5R1E6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-3Q5R1E6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-3Q5R1E6 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.97■□□□□ 0.47
Trav6-3Q5R1E6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.97■□□□□ 0.47
Trav6-3Q5R1E6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-3Q5R1E6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6-3Q5R1E6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav6-3Q5R1E6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-3Q5R1E6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-3Q5R1E6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-3Q5R1E6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-3Q5R1E6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-3Q5R1E6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-3Q5R1E6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav6-3Q5R1E6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-3Q5R1E6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav6-3Q5R1E6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav6-3Q5R1E6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Gm4799-201ENSMUST00000095396 657 ntBASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-3Q5R1E6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-3Q5R1E6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-3Q5R1E6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms