Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.48■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gm9397-201ENSMUST00000200125 605 ntBASIC17.46■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav15-1-dv6-1Q5R1D2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav15-1-dv6-1Q5R1D2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav15-1-dv6-1Q5R1D2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms