Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rapgef1Q3UHC1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rapgef1Q3UHC1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.42■■□□□ 1.5
Rapgef1Q3UHC1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rapgef1Q3UHC1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rapgef1Q3UHC1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rapgef1Q3UHC1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.41■■□□□ 1.5
Rapgef1Q3UHC1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rapgef1Q3UHC1 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.41■■□□□ 1.5
Rapgef1Q3UHC1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rapgef1Q3UHC1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rapgef1Q3UHC1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rapgef1Q3UHC1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rapgef1Q3UHC1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rapgef1Q3UHC1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.39■■□□□ 1.5
Rapgef1Q3UHC1 Gm4799-201ENSMUST00000095396 657 ntBASIC24.39■■□□□ 1.49
Rapgef1Q3UHC1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rapgef1Q3UHC1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rapgef1Q3UHC1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rapgef1Q3UHC1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Rapgef1Q3UHC1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rapgef1Q3UHC1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Rapgef1Q3UHC1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rapgef1Q3UHC1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rapgef1Q3UHC1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Rapgef1Q3UHC1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rapgef1Q3UHC1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.34■■□□□ 1.49
Rapgef1Q3UHC1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rapgef1Q3UHC1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rapgef1Q3UHC1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.33■■□□□ 1.49
Rapgef1Q3UHC1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rapgef1Q3UHC1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rapgef1Q3UHC1 Mir3960-201ENSMUST00000198213 73 ntBASIC24.32■■□□□ 1.48
Rapgef1Q3UHC1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Rapgef1Q3UHC1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rapgef1Q3UHC1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rapgef1Q3UHC1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.32■■□□□ 1.48
Rapgef1Q3UHC1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Rapgef1Q3UHC1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Cap2-205ENSMUST00000225824 1634 ntBASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rapgef1Q3UHC1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rapgef1Q3UHC1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rapgef1Q3UHC1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rapgef1Q3UHC1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rapgef1Q3UHC1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rapgef1Q3UHC1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rapgef1Q3UHC1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.28■■□□□ 1.48
Rapgef1Q3UHC1 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.28■■□□□ 1.48
Rapgef1Q3UHC1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.27■■□□□ 1.48
Rapgef1Q3UHC1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rapgef1Q3UHC1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rapgef1Q3UHC1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rapgef1Q3UHC1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rapgef1Q3UHC1 Gm11687-201ENSMUST00000118911 886 ntBASIC24.26■■□□□ 1.47
Rapgef1Q3UHC1 Gm9806-201ENSMUST00000051080 552 ntBASIC24.26■■□□□ 1.47
Rapgef1Q3UHC1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Scarna2-201ENSMUST00000157560 414 ntBASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rapgef1Q3UHC1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms