Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brf2Q3UAW9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Brf2Q3UAW9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brf2Q3UAW9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brf2Q3UAW9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Brf2Q3UAW9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brf2Q3UAW9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Brf2Q3UAW9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Brf2Q3UAW9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Brf2Q3UAW9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Brf2Q3UAW9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Brf2Q3UAW9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Brf2Q3UAW9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brf2Q3UAW9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Brf2Q3UAW9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Brf2Q3UAW9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brf2Q3UAW9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.12■□□□□ 0.97
Brf2Q3UAW9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brf2Q3UAW9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Brf2Q3UAW9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brf2Q3UAW9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brf2Q3UAW9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Brf2Q3UAW9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brf2Q3UAW9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brf2Q3UAW9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brf2Q3UAW9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Brf2Q3UAW9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.1■□□□□ 0.97
Brf2Q3UAW9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brf2Q3UAW9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brf2Q3UAW9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.09■□□□□ 0.97
Brf2Q3UAW9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.09■□□□□ 0.97
Brf2Q3UAW9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.09■□□□□ 0.97
Brf2Q3UAW9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.09■□□□□ 0.97
Brf2Q3UAW9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Brf2Q3UAW9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.08■□□□□ 0.97
Brf2Q3UAW9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Brf2Q3UAW9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Brf2Q3UAW9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Brf2Q3UAW9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.07■□□□□ 0.96
Brf2Q3UAW9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.07■□□□□ 0.96
Brf2Q3UAW9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Brf2Q3UAW9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Brf2Q3UAW9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Brf2Q3UAW9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.06■□□□□ 0.96
Brf2Q3UAW9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Brf2Q3UAW9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brf2Q3UAW9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Brf2Q3UAW9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brf2Q3UAW9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.05■□□□□ 0.96
Brf2Q3UAW9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brf2Q3UAW9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Brf2Q3UAW9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brf2Q3UAW9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Brf2Q3UAW9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brf2Q3UAW9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brf2Q3UAW9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Brf2Q3UAW9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Brf2Q3UAW9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Brf2Q3UAW9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Brf2Q3UAW9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Brf2Q3UAW9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brf2Q3UAW9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brf2Q3UAW9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21■□□□□ 0.95
Brf2Q3UAW9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21■□□□□ 0.95
Brf2Q3UAW9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Brf2Q3UAW9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Brf2Q3UAW9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brf2Q3UAW9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brf2Q3UAW9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.99■□□□□ 0.95
Brf2Q3UAW9 Terc-201ENSMUST00000082862 423 ntBASIC20.99■□□□□ 0.95
Brf2Q3UAW9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brf2Q3UAW9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brf2Q3UAW9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Brf2Q3UAW9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Brf2Q3UAW9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.98■□□□□ 0.95
Brf2Q3UAW9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.97■□□□□ 0.95
Brf2Q3UAW9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.96■□□□□ 0.95
Brf2Q3UAW9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Brf2Q3UAW9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.95■□□□□ 0.95
Brf2Q3UAW9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brf2Q3UAW9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Brf2Q3UAW9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Brf2Q3UAW9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms